DRSC/TRiP Functional Genomics Resources

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Protein Alignment elm and cib2

DIOPT Version :10

Sequence 1:NP_649568.1 Gene:elm / 40695 FlyBaseID:FBgn0037358 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_001072810.1 Gene:cib2 / 780271 XenbaseID:XB-GENE-985356 Length:187 Species:Xenopus tropicalis


Alignment Length:179 Identity:55/179 - (30%)
Similarity:94/179 - (52%) Gaps:19/179 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNKSSLFLRNEEIAQIQEETGFTPNQIERLYSRFTSLDRNDCGTLSRED---------LMRIPE 56
            ||||.::| .:|::...|:.|.||..:|.||:.||..|..|.......:|         ::.:||
 Frog     1 MGNKQTIF-TDEQLDAYQDCTFFTRKEILRLHGRFYELAPNIVPMDYTDDPDVKLPMQLIINMPE 64

  Fly    57 LAINPLCERIVHSFFAESNDDRVNFRQFMNVLAHFRPLRDNKQSKLNSREEKLKFAFKMYDLDDD 121
            |..||..||||.| |:|..:..::|..|:::.        :..|::..||.|..:|||:||.:.|
 Frog    65 LVENPFKERIVQS-FSEDGEGNLSFNDFVDMF--------SVMSEMAPRELKAIYAFKIYDFNTD 120

  Fly   122 GVISRDELLSILHMMVGANISQDQLVSIAERTILEADLCCQGKISFEDF 170
            ..|.:.:|...|:.:....:.::::..:.|:.|.|||:...||::|.||
 Frog   121 NFICKSDLEKTLNKLTREELEEEEVNLVCEKVIEEADMDGDGKLAFADF 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elmNP_649568.1 FRQ1 27..174 CDD:444056 45/153 (29%)
cib2NP_001072810.1 PTZ00184 <62..173 CDD:185504 37/117 (32%)

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