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Protein Alignment elm and Kcnip1
DIOPT Version :9
Sequence 1: | NP_001262295.1 |
Gene: | elm / 40695 |
FlyBaseID: | FBgn0037358 |
Length: | 189 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006246167.1 |
Gene: | Kcnip1 / 65023 |
RGDID: | 70886 |
Length: | 245 |
Species: | Rattus norvegicus |
Alignment Length: | 183 |
Identity: | 40/183 - (21%) |
Similarity: | 83/183 - (45%) |
Gaps: | 28/183 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 RNEEIAQIQEETGFTPNQIERLYSRFTSLDRNDC--GTLSREDLMRI-----PELAINPLCERIV 67
|.|.:.|::.:|.||..:::.||..| :|:| |.::.|...:| |....:.....:.
Rat 64 RPEGLEQLEAQTNFTKRELQVLYRGF----KNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLF 124
Fly 68 HSFFAESNDDRVNFRQFMNVLAHFRPLRDNKQSKLNSREEKLKFAFKMYDLDDDGVISRDELLSI 132
:: |..:....|.|..|:..|:.. || .:..|||::.|.:||::.||.|:::|::.|
Rat 125 NA-FDTTQTGSVKFEDFVTALSIL--LR-------GTVHEKLRWTFNLYDINKDGYINKEEMMDI 179
Fly 133 ---LHMMVGAN----ISQDQLVSIAERTILEADLCCQGKISFEDFCKALDRTD 178
::.|:|.. :.:|......:....:.|....|.::.::|.::....|
Rat 180 VKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDD 232
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
elm | NP_001262295.1 |
FRQ1 |
23..173 |
CDD:227455 |
35/163 (21%) |
Kcnip1 | XP_006246167.1 |
FRQ1 |
68..234 |
CDD:227455 |
38/179 (21%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1271942at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.920 |
|
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