DRSC/TRiP Functional Genomics Resources

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Protein Alignment elm and Cib2

DIOPT Version :9

Sequence 1:NP_001262295.1 Gene:elm / 40695 FlyBaseID:FBgn0037358 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_062660.1 Gene:Cib2 / 56506 MGIID:1929293 Length:187 Species:Mus musculus


Alignment Length:191 Identity:59/191 - (30%)
Similarity:94/191 - (49%) Gaps:29/191 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNKSSLFLRNEEIAQIQEETGFTPNQIERLYSRFTSLDRNDCGTLSRED---------LMRIPE 56
            ||||.::| ..|::...|:.|.|....|.:|::||..|..|......|:.         ::::||
Mouse     1 MGNKQTIF-TEEQLDNYQDCTFFNKKDILKLHARFYELAPNLVPMDYRKSPIVHVPMSLIIQMPE 64

  Fly    57 LAINPLCERIVHSFFAESNDDRVNFRQFM---NVLAHFRPLRDNKQSKLNSREEKLKFAFKMYDL 118
            |..||..||||.: |:|..:..:.|..|:   :||....|           ||.|..:|||:||.
Mouse    65 LRENPFKERIVEA-FSEDGEGNLTFNDFVDMFSVLCESAP-----------RELKANYAFKIYDF 117

  Fly   119 DDDGVISRDELLSILHMMVGANISQDQLVSIAERTILEADLCCQGKISFEDF----CKALD 175
            :.|..|.:::|...|..:..:.:.:|::|.:.::.|.||||...||:.|.||    .||.|
Mouse   118 NTDNFICKEDLEMTLARLTKSELEEDEVVLVCDKVIEEADLDGDGKLGFADFEDMIAKAPD 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elmNP_001262295.1 FRQ1 23..173 CDD:227455 48/165 (29%)
Cib2NP_062660.1 FRQ1 <68..178 CDD:227455 39/121 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846979
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.850

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