DRSC/TRiP Functional Genomics Resources

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Protein Alignment elm and cib1

DIOPT Version :9

Sequence 1:NP_001262295.1 Gene:elm / 40695 FlyBaseID:FBgn0037358 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_001011480.1 Gene:cib1 / 496971 XenbaseID:XB-GENE-970951 Length:190 Species:Xenopus tropicalis


Alignment Length:188 Identity:49/188 - (26%)
Similarity:92/188 - (48%) Gaps:20/188 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNKSSLFLRNEEIAQIQEETGFTPNQIERLYSRFTSLDRNDCGT------LSREDLMRIPELAI 59
            |||.|| .|..:.|.:.||.|..|..:|...|.||:.:.:.|..:      :.:|..:.:|||..
 Frog     1 MGNSSS-HLSKQLINEYQELTYLTKQEIILAYKRFSEVAQKDNRSNIESLRIPKERFLNLPELKA 64

  Fly    60 NPLCERIVHSF-FAESNDDRVNFRQFMNVLAHFRPLRDNKQSKLNSREEKLKFAFKMYDLDDDGV 123
            ||..:||...| .:|..|..::|..|:::|:.|        |:..:.|.|..:||:::|.|.||.
 Frog    65 NPFNDRICTVFSTSEQEDGSMSFEDFLDMLSAF--------SESATLEVKSHYAFRIFDFDGDGA 121

  Fly   124 ISRDELLSILHMMVG----ANISQDQLVSIAERTILEADLCCQGKISFEDFCKALDRT 177
            ::..:|..:::.:.|    ..:|..::..:....:.|:|:...|.|:..:|...:.|:
 Frog   122 LNESDLEHLVNKLTGDKDDTKLSNSEMRQLIANILEESDIDKDGTINHSEFQHVISRS 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elmNP_001262295.1 FRQ1 23..173 CDD:227455 38/160 (24%)
cib1NP_001011480.1 FRQ1 20..181 CDD:227455 40/168 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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