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Protein Alignment elm and kcnip1b
DIOPT Version :9
Sequence 1: | NP_001262295.1 |
Gene: | elm / 40695 |
FlyBaseID: | FBgn0037358 |
Length: | 189 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_021334841.1 |
Gene: | kcnip1b / 494089 |
ZFINID: | ZDB-GENE-041212-57 |
Length: | 225 |
Species: | Danio rerio |
Alignment Length: | 192 |
Identity: | 41/192 - (21%) |
Similarity: | 85/192 - (44%) |
Gaps: | 39/192 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 RNEEIAQIQEETGFTPNQIERLYSRFTSLDRNDC--GTLSREDLMRI-----PELAINPLCERIV 67
|.|.:.|::.:|.|:..:::.||..| :|:| |.::.:....| |....:.....:.
Zfish 44 RPEGLEQLEAQTNFSKQELQVLYRGF----KNECPSGVVNEDTFKHIYAQFFPHGDASTYAHYLF 104
Fly 68 HSFFAESNDDRVNFRQFMNVLAHFRPLRDNKQSKLNSREEKLKFAFKMYDLDDDGVISRDELLSI 132
|:|...:|.. :.|..|:..|:.. || .:..:||::.|.:||::.||.|:::|:..|
Zfish 105 HAFDTRNNGS-IKFEDFVMGLSTL--LR-------GTVRDKLEWTFHLYDINKDGFINKEEMTEI 159
Fly 133 ---LHMMVG--------ANISQDQLVSIAERTILEADLCCQGKISFEDFCKALDRTDVDQKM 183
::.|:| .::.:..:.:..|:.....| |.::.|:|..|... |:.|
Zfish 160 VRAIYDMMGKYTYPALKGDVPKAHVDAFFEKMDKNKD----GVVTLEEFVLACQE---DENM 214
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
elm | NP_001262295.1 |
FRQ1 |
23..173 |
CDD:227455 |
34/167 (20%) |
kcnip1b | XP_021334841.1 |
FRQ1 |
48..205 |
CDD:227455 |
35/174 (20%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1271942at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.920 |
|
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