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Protein Alignment elm and chp1
DIOPT Version :9
| Sequence 1: | NP_001262295.1 |
Gene: | elm / 40695 |
FlyBaseID: | FBgn0037358 |
Length: | 189 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001004859.1 |
Gene: | chp1 / 448152 |
XenbaseID: | XB-GENE-1007598 |
Length: | 193 |
Species: | Xenopus tropicalis |
| Alignment Length: | 194 |
Identity: | 119/194 - (61%) |
| Similarity: | 147/194 - (75%) |
Gaps: | 6/194 - (3%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MGNKSSLFLRNEEIAQIQEETGFTPNQIERLYSRFTSLDRNDCGTLSREDLMRIPELAINPLCER 65
||:::|..||:|||.:|::||||:.:||.||||||||||:.:.|||||||..||||||||||.:|
Frog 1 MGSRASTLLRDEEIEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDR 65
Fly 66 IVHSFFAESNDDRVNFRQFMNVLAHFRPLRD-----NKQSKLNSREEKLKFAFKMYDLDDDGVIS 125
|:::||.| .:|:||||.||..||||||:.| |.|..||||..||.|||::||||.|..||
Frog 66 IINAFFTE-GEDQVNFRGFMRTLAHFRPIEDNSKDANSQEPLNSRSNKLLFAFRLYDLDKDDKIS 129
Fly 126 RDELLSILHMMVGANISQDQLVSIAERTILEADLCCQGKISFEDFCKALDRTDVDQKMSIRFLN 189
|:|||.:|.||||.|||.|||.|||:|||.|||......|||.:|.|.|::.||:||||||||:
Frog 130 REELLQVLRMMVGVNISDDQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVDVEQKMSIRFLH 193
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| elm | NP_001262295.1 |
FRQ1 |
23..173 |
CDD:227455 |
95/154 (62%) |
| chp1 | NP_001004859.1 |
FRQ1 |
1..180 |
CDD:227455 |
109/179 (61%) |
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
1 |
1.000 |
131 |
1.000 |
Domainoid score |
I5112 |
| eggNOG |
0 | 0.000 |
Not matched by this tool. |
| Hieranoid |
1 |
1.000 |
- |
- |
|
|
| Homologene |
1 |
1.000 |
- |
- |
|
H5235 |
| Inparanoid |
1 |
1.050 |
227 |
1.000 |
Inparanoid score |
I3399 |
| OMA |
1 |
1.010 |
- |
- |
|
QHG53747 |
| OrthoDB |
1 |
1.010 |
- |
- |
|
D1271942at2759 |
| OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000640 |
| OrthoInspector |
1 |
1.000 |
- |
- |
|
oto105439 |
| Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR46002 |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R3958 |
| SonicParanoid |
1 |
1.000 |
- |
- |
|
X2469 |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
12 | 12.110 |
|
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