DRSC/TRiP Functional Genomics Resources

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Protein Alignment elm and sowi

DIOPT Version :10

Sequence 1:NP_649568.1 Gene:elm / 40695 FlyBaseID:FBgn0037358 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_649671.2 Gene:sowi / 40809 FlyBaseID:FBgn0037460 Length:217 Species:Drosophila melanogaster


Alignment Length:164 Identity:32/164 - (19%)
Similarity:76/164 - (46%) Gaps:20/164 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LYSRFTSLDRNDCGTLSREDLMRIPELAINPLCERIV-HSFFAESNDDR-VNFRQFMNVLAHFRP 93
            :|.:|:..:...|..::::...:|..:..|....::: .:..|.:.|.: |:.|.::::...:  
  Fly    44 VYYKFSKANGPQCKQMTKKQFYQIFLVLFNVASVQVIERTLLAITKDTKYVSPRAWIHLFDLY-- 106

  Fly    94 LRDNKQSKLNSREEKLKFAFKMYDLDDDGVISRDELLSILHMMVGANISQDQL----VSIAERTI 154
                   ..|..:.:::|||::||....|||.|:::.:......... .:|:|    ..:.|..:
  Fly   107 -------TTNDIQVRMRFAFEVYDTKGTGVIDREQVGTACEKFFYGE-DEDELNELKADMTEFLM 163

  Fly   155 LEADLCCQGKISFEDFCKALDRTDVDQKMSIRFL 188
            .:.||...|.||:||:...:::    |.:.:.||
  Fly   164 KKFDLDKDGVISYEDYSTVVEQ----QPILVEFL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elmNP_649568.1 FRQ1 27..174 CDD:444056 29/148 (20%)
sowiNP_649671.2 EF-hand_7 114..179 CDD:463900 18/65 (28%)

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