DRSC/TRiP Functional Genomics Resources

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Protein Alignment elm and sowi

DIOPT Version :9

Sequence 1:NP_001262295.1 Gene:elm / 40695 FlyBaseID:FBgn0037358 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_649671.2 Gene:sowi / 40809 FlyBaseID:FBgn0037460 Length:217 Species:Drosophila melanogaster


Alignment Length:164 Identity:32/164 - (19%)
Similarity:76/164 - (46%) Gaps:20/164 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LYSRFTSLDRNDCGTLSREDLMRIPELAINPLCERIV-HSFFAESNDDR-VNFRQFMNVLAHFRP 93
            :|.:|:..:...|..::::...:|..:..|....::: .:..|.:.|.: |:.|.::::...:  
  Fly    44 VYYKFSKANGPQCKQMTKKQFYQIFLVLFNVASVQVIERTLLAITKDTKYVSPRAWIHLFDLY-- 106

  Fly    94 LRDNKQSKLNSREEKLKFAFKMYDLDDDGVISRDELLSILHMMVGANISQDQL----VSIAERTI 154
                   ..|..:.:::|||::||....|||.|:::.:......... .:|:|    ..:.|..:
  Fly   107 -------TTNDIQVRMRFAFEVYDTKGTGVIDREQVGTACEKFFYGE-DEDELNELKADMTEFLM 163

  Fly   155 LEADLCCQGKISFEDFCKALDRTDVDQKMSIRFL 188
            .:.||...|.||:||:...:::    |.:.:.||
  Fly   164 KKFDLDKDGVISYEDYSTVVEQ----QPILVEFL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elmNP_001262295.1 FRQ1 23..173 CDD:227455 29/147 (20%)
sowiNP_649671.2 EF-hand_7 115..179 CDD:290234 18/64 (28%)
EFh 116..178 CDD:238008 17/62 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0034
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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