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Protein Alignment elm and Cib2
DIOPT Version :9
Sequence 1: | NP_001262295.1 |
Gene: | elm / 40695 |
FlyBaseID: | FBgn0037358 |
Length: | 189 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_611523.3 |
Gene: | Cib2 / 37363 |
FlyBaseID: | FBgn0034558 |
Length: | 189 |
Species: | Drosophila melanogaster |
Alignment Length: | 182 |
Identity: | 59/182 - (32%) |
Similarity: | 90/182 - (49%) |
Gaps: | 23/182 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MGNKSSLFLRNEEIAQIQEETGFTPNQIERLYSRFTSLDRNDC-------GTLSR-----EDLMR 53
||||...| ..:|:...|:.|.||..:|.|::.||..| |.|. |..|. |.:.:
Fly 1 MGNKVVTF-TEQELDDYQDCTFFTRKEILRVHKRFREL-RPDLVPRQMTEGQASSVKVPCECIEK 63
Fly 54 IPELAINPLCERIVHSFFAESNDDRVNFRQFMNVLAHFRPLRDNKQSKLNSREEKLKFAFKMYDL 118
:|||..||...||..: |:......::|..|::.|:.| |:...|:.|:.:|||:||.
Fly 64 MPELRENPFRRRICEA-FSRDGQGNLSFEDFLDALSVF--------SEQAPRDIKVFYAFKIYDF 119
Fly 119 DDDGVISRDELLSILHMMVGANISQDQLVSIAERTILEADLCCQGKISFEDF 170
|.||.|...:|:|.|..|....:|.::...||::.|.|||:...||:|..:|
Fly 120 DQDGFIGHADLMSCLTTMTKNELSPEEHQQIADKVIEEADVDGDGKLSILEF 171
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
elm | NP_001262295.1 |
FRQ1 |
23..173 |
CDD:227455 |
51/160 (32%) |
Cib2 | NP_611523.3 |
FRQ1 |
20..180 |
CDD:227455 |
52/162 (32%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45464103 |
Domainoid |
1 |
1.000 |
52 |
1.000 |
Domainoid score |
I4251 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1271942at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.850 |
|
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