DRSC/TRiP Functional Genomics Resources

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Protein Alignment elm and GUCA1A

DIOPT Version :9

Sequence 1:NP_001262295.1 Gene:elm / 40695 FlyBaseID:FBgn0037358 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_001371839.1 Gene:GUCA1A / 2978 HGNCID:4678 Length:201 Species:Homo sapiens


Alignment Length:171 Identity:43/171 - (25%)
Similarity:80/171 - (46%) Gaps:21/171 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EETGFTPNQIERLYSRFTSLDRNDC--GTLSREDLMRIPELA-INPLCERIVHSFFAESNDDRVN 80
            ||...|  :..:.|.:|.:    :|  |.|:..:..:...|. ::|...:.|...|...:.::..
Human    11 EELSST--ECHQWYKKFMT----ECPSGQLTLYEFRQFFGLKNLSPSASQYVEQMFETFDFNKDG 69

  Fly    81 FRQFMNVLAHFRPLRDNKQSKLNSREEKLKFAFKMYDLDDDGVISRDELLSILHMMVGANISQDQ 145
            :..||..:|....:...|.      |:||::.||:||:|.:|.|.|||||:|:..:...|...|.
Human    70 YIDFMEYVAALSLVLKGKV------EQKLRWYFKLYDVDGNGCIDRDELLTIIQAIRAINPCSDT 128

  Fly   146 LVSIAERT---ILEADLCCQGKISFEDFCKALDRTDVDQKM 183
            .::..|.|   ..:.|:...|::|.|:|.:.:.:   ||.:
Human   129 TMTAEEFTDTVFSKIDVNGDGELSLEEFIEGVQK---DQML 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elmNP_001262295.1 FRQ1 23..173 CDD:227455 39/155 (25%)
GUCA1ANP_001371839.1 FRQ1 12..163 CDD:227455 40/165 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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