DRSC/TRiP Functional Genomics Resources

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Protein Alignment elm and Tesc

DIOPT Version :10

Sequence 1:NP_649568.1 Gene:elm / 40695 FlyBaseID:FBgn0037358 Length:189 Species:Drosophila melanogaster
Sequence 2:XP_006249488.1 Gene:Tesc / 288689 RGDID:1566317 Length:247 Species:Rattus norvegicus


Alignment Length:233 Identity:72/233 - (30%)
Similarity:118/233 - (50%) Gaps:55/233 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NEEIAQIQEETGFTPNQIERLYSRFTSLDRND-----CGT------------------------- 45
            :||:.:::.:|||:.:|||:|:.||..|..:.     |.:                         
  Rat     8 SEEVRELEGKTGFSSDQIEQLHRRFKQLSGDQPTIRLCSSRLCSVRSVSVPPTSQLPLSVKLQWR 72

  Fly    46 --LSREDLMRIPELAINPLCERIVHSFFAESN--------DDRVNFRQFMNVLAHFRPL---RDN 97
              .|:|:...:|:|.:||:..:||.:||...|        .|.:||..|:.::::|||:   ...
  Rat    73 PVCSKENFNNVPDLELNPIRSKIVRAFFDNRNLRKGSSGLADEINFEDFLTIMSYFRPIDTTLGE 137

  Fly    98 KQSKLNSREEKLKFAFKMYDLDDDGVISRDELLSILHMMVGAN--ISQDQLVSIAERTILEADLC 160
            :|.:| ||:|||||.|.|||.|.||.|:.:|..:::..::..|  |.::...|||:..::||...
  Rat   138 EQVEL-SRKEKLKFLFHMYDSDSDGRITLEEYRNVVEELLSGNPHIEKESARSIADGAMMEAASV 201

  Fly   161 CQGK---------ISFEDFCKALDRTDVDQKMSIRFLN 189
            |.|:         |:||||.|.....|::.||.|||||
  Rat   202 CVGQMEPDQVYEGITFEDFLKIWQGIDIETKMHIRFLN 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elmNP_649568.1 FRQ1 27..174 CDD:444056 59/200 (30%)
TescXP_006249488.1 EF-hand_7 92..172 CDD:463900 30/80 (38%)
EF-hand_7 145..225 CDD:463900 29/79 (37%)
EFh 147..>175 CDD:415501 13/27 (48%)

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