Protein Alignment elm and ncs-4

DIOPT Version :9

• Sequence 1: NP_001262295.1
• Gene: elm / 40695
• FlyBaseID: FBgn0037358
• Length: 189
• Species: Drosophila melanogaster
• Sequence 2: NP_509708.2
• Gene: ncs-4 / 184757
• WormBaseID: WBGene00008998
• Length: 224
• Species: Caenorhabditis elegans
• Alignment Length: 186
• Identity: 43/186 - (23%)
• Similarity: 85/186 - (45%)
• Gaps: 34/186 - (18%)

  Fly    10 RNEEIAQIQEETGFTPNQIERLYSRFTSLDRNDCGTLSREDLMR------IPELAINPLCERIVH 68
            |...:.|:.:||.|:.|::..:|..|.....|   .:..:::||      .|...|....:.:..
 Worm    41 RPSSLQQVVDETHFSKNEVRAIYRAFKETSPN---AVINKNIMREKFAELFPHGDIEHYSDLLFE 102

  Fly    69 SFFAESNDDRVNFRQFMNVLAHFRPLRDNKQSKL--NSREEKLKFAFKMYDLDDDGVISRDELLS 131
            :|..:.| ..:||::|:..|           |.|  .:.:|||.:.:|:||..:.|.::.|.|..
 Worm   103 TFDNDGN-GTINFQEFVKAL-----------SILCRGTLDEKLDWLYKLYDPKEKGEVTWDRLFY 155

  Fly   132 ILHMM---VGANI----SQDQLVSIAERTILEADLCCQGKISFEDF---CKALDRT 177
            ::..|   :|.:.    :::|...:..:...:.|:..:|:|:.:||   ||. |||
 Worm   156 VITSMDDLMGKHARPHHTREQKCELTNQVFAKFDVGKKGRITKKDFLHICKT-DRT 210

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
elm	NP_001262295.1	FRQ1	23..173	CDD:227455	35/167 (21%)
ncs-4	NP_509708.2	FRQ1	41..211	CDD:227455	43/186 (23%)
		EFh	101..149	CDD:238008	15/59 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1271942at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920