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Protein Alignment elm and cnb-1
DIOPT Version :9
Sequence 1: | NP_001262295.1 |
Gene: | elm / 40695 |
FlyBaseID: | FBgn0037358 |
Length: | 189 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001256318.1 |
Gene: | cnb-1 / 179572 |
WormBaseID: | WBGene00000554 |
Length: | 171 |
Species: | Caenorhabditis elegans |
Alignment Length: | 163 |
Identity: | 66/163 - (40%) |
Similarity: | 96/163 - (58%) |
Gaps: | 9/163 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 21 TGFTPNQIERLYSRFTSLDRNDCGTLSREDLMRIPELAINPLCERIVHSFFAESNDDRVNFRQFM 85
:.|...::.||..||..||.:..|:||.|:.|.:|||..|||.:|:: ..|.|..:..|:||:|:
Worm 13 SNFDAYELRRLTRRFKKLDVDGSGSLSVEEFMSLPELQQNPLVQRVI-DIFDEDGNGEVDFREFI 76
Fly 86 NVLAHFRPLRDNKQSKLNSREEKLKFAFKMYDLDDDGVISRDELLSILHMMVGANISQDQLVSIA 150
..::.| |....:..||||||::||:|.||.||..||..:|.||||.|:...||..|.
Worm 77 QGISQF--------SVKGDKNTKLKFAFRIYDMDRDGFISNGELFQVLKMMVGNNLKDSQLQQIV 133
Fly 151 ERTILEADLCCQGKISFEDFCKALDRTDVDQKM 183
::|||..|....|||||::||..::.|:|.:||
Worm 134 DKTILFHDKDGDGKISFQEFCDVVEHTEVHKKM 166
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
elm | NP_001262295.1 |
FRQ1 |
23..173 |
CDD:227455 |
62/149 (42%) |
cnb-1 | NP_001256318.1 |
FRQ1 |
13..161 |
CDD:227455 |
62/156 (40%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
- |
- |
|
QHG53747 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1271942at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000640 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.930 |
|
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