Protein Alignment elm and chpf-1

DIOPT Version :10

• Sequence 1: NP_649568.1
• Gene: elm / 40695
• FlyBaseID: FBgn0037358
• Length: 189
• Species: Drosophila melanogaster
• Sequence 2: NP_001379127.1
• Gene: chpf-1 / 179415
• WormBaseID: WBGene00014109
• Length: 195
• Species: Caenorhabditis elegans
• Alignment Length: 195
• Identity: 113/195 - (57%)
• Similarity: 148/195 - (75%)
• Gaps: 6/195 - (3%)

  Fly     1 MGNKSSLFLRNEEIAQIQEETGFTPNQIERLYSRFTSLDRNDCGTLSREDLMRIPELAINPLCER 65
            |||.|||.||:|||.:|..||.|..|||.||||||.|||:...|.|||:|.:.:||||:|||.:|
 Worm     1 MGNSSSLMLRDEEIEEIMSETEFNRNQIVRLYSRFLSLDKKGQGFLSRDDFLNVPELAVNPLGDR 65

  Fly    66 IVHSFF--AESNDD----RVNFRQFMNVLAHFRPLRDNKQSKLNSREEKLKFAFKMYDLDDDGVI 124
            ||.:||  |.||.|    ::|||||:.:||||:|:...|::.||||::||.||||||||:.:..|
 Worm    66 IVDAFFTLASSNGDNEEQQLNFRQFVRILAHFQPISRVKKNALNSRKDKLLFAFKMYDLNKNDYI 130

  Fly   125 SRDELLSILHMMVGANISQDQLVSIAERTILEADLCCQGKISFEDFCKALDRTDVDQKMSIRFLN 189
            :|:|...||:.||||||:.|||..||:|||.|||....|||||::||:|:::||:::||||||||
 Worm   131 TREEFKVILNSMVGANITSDQLDKIADRTIEEADADRDGKISFDEFCRAMEKTDIEEKMSIRFLN 195

  Fly   190  189
             Worm   196  195

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
elm	NP_649568.1	FRQ1	27..174	CDD:444056	86/152 (57%)
chpf-1	NP_001379127.1	FRQ1	27..182	CDD:444056	87/154 (56%)
		EFh	114..180	CDD:238008	39/65 (60%)