Protein Alignment elm and pbo-1

DIOPT Version :10

• Sequence 1: NP_649568.1
• Gene: elm / 40695
• FlyBaseID: FBgn0037358
• Length: 189
• Species: Drosophila melanogaster
• Sequence 2: NP_497601.1
• Gene: pbo-1 / 175385
• WormBaseID: WBGene00003941
• Length: 196
• Species: Caenorhabditis elegans
• Alignment Length: 196
• Identity: 86/196 - (43%)
• Similarity: 123/196 - (62%)
• Gaps: 9/196 - (4%)

  Fly     1 MGNKSSLFLRNEEIAQIQEETGFTPNQIERLYSRFTSLDRNDCGT-----LSREDLMRIPELAIN 60
            ||..||. :...|:..:..|:|.:...|.:||.||.||..:...|     |::.|...|.||..|
 Worm     1 MGQNSSQ-IPEHELEHLSIESGLSRGGILKLYGRFISLATHRDKTTNEYFLTKGDFQSIAELKQN 64

  Fly    61 PLCERIVHSFFAES---NDDRVNFRQFMNVLAHFRPLRDNKQSKLNSREEKLKFAFKMYDLDDDG 122
            ||.:||:.:|||::   ...:|.|:.|:.||:||||:..||....||||.||:|||.||||:..|
 Worm    65 PLGDRIIDAFFADAEVLERRKVYFKDFVKVLSHFRPINKNKPHPWNSREAKLRFAFTMYDLNKSG 129

  Fly   123 VISRDELLSILHMMVGANISQDQLVSIAERTILEADLCCQGKISFEDFCKALDRTDVDQKMSIRF 187
            .|::||...||.||:|..:.:||:.|||:||:.|||....|.|:|::||.|:::||::||||.||
 Worm   130 TITKDEFQDILAMMIGVGVPKDQVNSIADRTMREADRDGDGFITFQEFCNAMEKTDIEQKMSFRF 194

  Fly   188 L 188
            |
 Worm   195 L 195

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
elm	NP_649568.1	FRQ1	27..174	CDD:444056	69/154 (45%)
pbo-1	NP_497601.1	FRQ1	49..183	CDD:444056	62/133 (47%)
		EFh	115..181	CDD:238008	33/65 (51%)