DRSC/TRiP Functional Genomics Resources

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Protein Alignment elm and guca1a

DIOPT Version :9

Sequence 1:NP_001262295.1 Gene:elm / 40695 FlyBaseID:FBgn0037358 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_571945.1 Gene:guca1a / 140430 ZFINID:ZDB-GENE-011128-5 Length:189 Species:Danio rerio


Alignment Length:184 Identity:44/184 - (23%)
Similarity:79/184 - (42%) Gaps:35/184 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 TGFTPNQIERL-----YSRFTSLDRNDC--GTLSREDLMRIPEL-AINPLCERIVHSFFAESNDD 77
            ||.|.:.::.:     |.:|.:    :|  |.|:..:..:...| .::|.....:...|...:.:
Zfish     5 TGSTVDDLQAVEMHLWYKKFMT----ECPSGQLTLHEFKQFFGLRGLDPKANAYIEQMFRTFDMN 65

  Fly    78 RVNFRQFMNVLAHFRPLRDNKQSKLNSREEKLKFAFKMYDLDDDGVISRDELLSILHMMVGANIS 142
            :..:..||..:|....:...|.      |.||::.||:||:|.:|.|.|.|||:|:..:...|.|
Zfish    66 KDGYIDFMEYVAALSLVMRGKM------EHKLRWYFKLYDVDGNGCIDRYELLNIIKAIRAINGS 124

  Fly   143 QDQLVSIAE---RTILEADLCCQGKISFEDF--------------CKALDRTDV 179
            :.|..|..|   |.....|:...|::|.::|              .|:||.|.:
Zfish   125 ETQESSAEEFTNRVFERIDINGDGELSLDEFVAGARSDEEFMEVMMKSLDLTHI 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elmNP_001262295.1 FRQ1 23..173 CDD:227455 38/174 (22%)
guca1aNP_571945.1 EFh <27..76 CDD:298682 8/48 (17%)
EFh 54..116 CDD:238008 20/67 (30%)
EF-hand_7 55..115 CDD:290234 19/65 (29%)
EFh 90..160 CDD:238008 24/69 (35%)
EF-hand_7 91..157 CDD:290234 23/65 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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