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Protein Alignment elm and kcnip1
DIOPT Version :9
Sequence 1: | NP_001262295.1 |
Gene: | elm / 40695 |
FlyBaseID: | FBgn0037358 |
Length: | 189 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_002937770.1 |
Gene: | kcnip1 / 100497014 |
XenbaseID: | XB-GENE-973728 |
Length: | 230 |
Species: | Xenopus tropicalis |
Alignment Length: | 193 |
Identity: | 41/193 - (21%) |
Similarity: | 79/193 - (40%) |
Gaps: | 48/193 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 RNEEIAQIQEETGFTPNQIERLYSRFTSLDRNDCGTLSREDLMRIPELAINPLCERIVHSFFAES 74
|.|.:.|::.:|.|...:::.||..| :|:| |...:|....::::|.|...
Frog 49 RPEGLEQLEAQTNFNKRELQVLYRGF----KNEC-----------PSGVVNEDTFKLIYSQFFPH 98
Fly 75 ND-----------------DRVNFRQFMNVLAHFRPLRDNKQSKLNSREEKLKFAFKMYDLDDDG 122
.| ..|.|..|:..|:.. || .|..|||::.|.:||::.||
Frog 99 GDASMYAHYLFNAFDAAQSGSVKFEDFVAALSVL--LR-------GSIHEKLRWTFNLYDINKDG 154
Fly 123 VISRDELLSI---LHMMVGAN----ISQDQLVSIAERTILEADLCCQGKISFEDFCKALDRTD 178
.|:::|::.| ::.|:|.. :.:|......|....:.|....|.::.::|.::....|
Frog 155 NINKEEMMDIVKAIYDMMGKYTYPVLKEDAPKQHVEVFFQKMDKNKDGVVTLDEFIESCQEDD 217
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
elm | NP_001262295.1 |
FRQ1 |
23..173 |
CDD:227455 |
36/173 (21%) |
kcnip1 | XP_002937770.1 |
FRQ1 |
53..219 |
CDD:227455 |
39/189 (21%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1271942at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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