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Protein Alignment elm and kcnip2
DIOPT Version :9
Sequence 1: | NP_001262295.1 |
Gene: | elm / 40695 |
FlyBaseID: | FBgn0037358 |
Length: | 189 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_031761874.1 |
Gene: | kcnip2 / 100494608 |
XenbaseID: | XB-GENE-988846 |
Length: | 252 |
Species: | Xenopus tropicalis |
Alignment Length: | 188 |
Identity: | 46/188 - (24%) |
Similarity: | 93/188 - (49%) |
Gaps: | 28/188 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 SSLFLRNEEIAQIQEETGFTPNQIERLYSRFTSLDRNDC--GTLSREDLMRI-----PELAINPL 62
|::..|.|.:.|:||:|.||..:::.||..| :|:| |.::.|:..:| |: ..:.:
Frog 66 STVCHRPEGLEQLQEQTKFTKKELQVLYRGF----KNECPSGIVNEENFKQIYSQFFPQ-GDSSM 125
Fly 63 CERIVHSFFAESNDDRVNFRQFMNVLAHFRPLRDNKQSKLNSREEKLKFAFKMYDLDDDGVISRD 127
....:.:.|...:...|:|..|:..|:.. || .:.::||.:||.:|||:.||.|:::
Frog 126 YAHFLFNAFDTDHSGSVSFEDFVAGLSVI--LR-------GTIDDKLNWAFNLYDLNKDGCITKE 181
Fly 128 ELLSI---LHMMVG----ANISQDQLVSIAERTILEADLCCQGKISFEDFCKALDRTD 178
|:|.| ::.|:| .|:.::......|....:.|....|.::.|:|.::..:.:
Frog 182 EMLDIMKSIYDMMGKYTYPNMREEAPREHVENFFQKMDRNKDGVVTIEEFIESCQKDE 239
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
elm | NP_001262295.1 |
FRQ1 |
23..173 |
CDD:227455 |
39/163 (24%) |
kcnip2 | XP_031761874.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1271942at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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