DRSC/TRiP Functional Genomics Resources

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Protein Alignment elm and si:ch211-103a14.5

DIOPT Version :9

Sequence 1:NP_001262295.1 Gene:elm / 40695 FlyBaseID:FBgn0037358 Length:189 Species:Drosophila melanogaster
Sequence 2:XP_002666176.1 Gene:si:ch211-103a14.5 / 100330921 ZFINID:ZDB-GENE-091204-414 Length:192 Species:Danio rerio


Alignment Length:129 Identity:35/129 - (27%)
Similarity:63/129 - (48%) Gaps:28/129 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 ESNDDR-VNFRQFMNVLAHFRPLRDNKQSKLNSREEKLKFAFKMYDLDDDGVISRDELLSILHMM 136
            :.|||. ::|.:::..|:..  |:...|       :||::.||:||:|..|.|.|:|||.|:..:
Zfish    63 DMNDDGCIDFMEYVAALSLI--LKGGVQ-------QKLRWYFKLYDVDGSGCIDREELLLIVKAI 118

  Fly   137 VGANISQDQLVSIAERTIL---EADLCCQGKISFEDF--------------CKALDRTDVDQKM 183
            ...| ..:|.||..|.|.:   :.||...|.::.::|              .::||.|.:.:|:
Zfish   119 RAIN-GVEQEVSAEEFTNMVFEKIDLNADGVLTMDEFMEGIQADEYLSTMLTQSLDLTHIVKKI 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elmNP_001262295.1 FRQ1 23..173 CDD:227455 31/117 (26%)
si:ch211-103a14.5XP_002666176.1 EF-hand_8 29..79 CDD:290545 4/15 (27%)
EF-hand_7 55..112 CDD:290234 18/57 (32%)
EFh 58..116 CDD:238008 21/61 (34%)
EFh 90..159 CDD:238008 24/69 (35%)
EF-hand_7 91..158 CDD:290234 23/67 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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