DRSC/TRiP Functional Genomics Resources

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Protein Alignment elm and XB5856770

DIOPT Version :9

Sequence 1:NP_001262295.1 Gene:elm / 40695 FlyBaseID:FBgn0037358 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_001096526.1 Gene:XB5856770 / 100125166 XenbaseID:XB-GENE-5856771 Length:211 Species:Xenopus tropicalis


Alignment Length:178 Identity:40/178 - (22%)
Similarity:76/178 - (42%) Gaps:40/178 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 EIAQIQEETGFTPNQIERLYSRFTSLDRNDC--GTLSREDLMRIPELAINPLCERIV---HSFFA 72
            ::|.|...:|....::...|.:|.    .:|  |.::..:..:.       .|:..|   .|.:|
 Frog     3 QVATIPLRSGSYVLELHEWYRKFV----QECPSGLITLHEFRKY-------FCDCTVGTESSEYA 56

  Fly    73 E--------SNDDRVNFRQFMNVLAHFRPLRDNKQSKLNSREEKLKFAFKMYDLDDDGVISRDEL 129
            |        :.|..|:||:::..::....         .|.||||:::|::||.|.||.|:|.|:
 Frog    57 EKIFRNLDKNGDGIVDFREYVTAISMLAQ---------GSPEEKLRWSFELYDKDRDGTITRCEM 112

  Fly   130 LSIL----HMMVGANISQDQLVSIAE---RTILEADLCCQGKISFEDF 170
            |.|:    .|.:..:::|....:..|   |..:..|......||.::|
 Frog   113 LDIMKAVYKMSLATSLAQSNPPTAEECTNRIFIRLDKDHNALISLQEF 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elmNP_001262295.1 FRQ1 23..173 CDD:227455 37/168 (22%)
XB5856770NP_001096526.1 FRQ1 17..167 CDD:227455 37/164 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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