DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec23 and AT5G43670

DIOPT Version :9

Sequence 1:NP_001246932.1 Gene:Sec23 / 40694 FlyBaseID:FBgn0262125 Length:781 Species:Drosophila melanogaster
Sequence 2:NP_568626.1 Gene:AT5G43670 / 834387 AraportID:AT5G43670 Length:794 Species:Arabidopsis thaliana


Alignment Length:818 Identity:340/818 - (41%)
Similarity:481/818 - (58%) Gaps:90/818 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DGVRLTWNVWPSSRIEASRLVVPLACLYQPLKERPDLPPIQYEPVLCTRSNCRAILNPLCQVDYR 79
            :|:|.:||.||:::.:...|||||:.:|.||....:||.|.|:|::|:|  |.|:|||..:|||:
plant    10 EGLRWSWNSWPTTKSDCESLVVPLSIMYTPLMHFSELPTIPYDPLICSR--CGAVLNPYARVDYQ 72

  Fly    80 AKLWVCNFCFQRNPFPPQYAAISEQHQPAELIPGFSTIEY---------TITRAPT--------- 126
            :::|.|.|||.:|.||..|:.|:|.:.||||.|.:|.:||         :.|..||         
plant    73 SRIWSCPFCFHKNLFPRSYSGITETNLPAELFPTYSAVEYSPLPSRQSGSNTTTPTAAASWSNGF 137

  Fly   127 ------MP------------------------PVFIFLVDTCMDEEELDALKDSLQMSLSLLPTN 161
                  ||                        |.|:|:||..|.|:||.|::..:...:..||.|
plant   138 NQGVRSMPSNSSFSSLASSTVGGGGGVISELGPAFVFVVDASMVEDELRAVRSDVLFVIEQLPEN 202

  Fly   162 ALVGLITFGKMIQVHELGAEGCSKSYVFRGTKDLTAKQVQDMLGIGRGAAPGPQQQQHLPGQPAG 226
            .||.||||..|::|::||...|||..||.|.:||:..|:|..||:|..     :|..|      |
plant   203 CLVALITFDSMVRVYDLGFSECSKVVVFHGERDLSPDQIQQFLGLGYS-----KQFHH------G 256

  Fly   227 AAAPVPPAHRFLQPIGQCDAALGDLLSELQRDPWPVP-----QGKRYLRSTGAALSIAVGLLECT 286
            ..:.: ....||.|:.:|:..|.....|:      :|     .|.|..||||||:|.|:||||..
plant   257 KMSAI-RKQSFLLPLVECEFNLTSAFEEI------IPLVDVKPGHRPHRSTGAAISTALGLLEGC 314

  Fly   287 YPNTGGRIMTFVGGPCSQGPGQVVDDELKHPIRSHHDIHKDNVRFMKKAIKHYDALALRAATNGH 351
            ...||.|||.|..||.::|||.:||.:|.:.||:|.||...:|.:..|:...|..||.|...:..
plant   315 SVTTGSRIMVFTSGPATRGPGIIVDSDLSNSIRTHRDIITGHVSYYDKSCGFYKKLAKRLCDSSV 379

  Fly   352 SVDIYSCALDQTGLLEMKQLCNSTGGHMVMGDSFNSSLFKQTFQRVFARDGRNDLKMAFNATLEV 416
            .:|:::|:|||.|..|::.....:||.:::|::|.|..||:..:.:|.||...:|.|.|:.:|||
plant   380 VLDVFACSLDQVGAAELRYAVEMSGGFLLLGETFESEQFKKCLRHIFIRDADGNLSMYFDVSLEV 444

  Fly   417 KCSRELKISGGIGSCVSLNVKSPSVSDVEIGMGNTVQWKLCTLNPSSTVAYFFEVVN-QHAAPIP 480
            ..:::::|.|.:|..|||..|:..||:.|||.|.|..||..|:...:.|::||.|.| |:..|.|
plant   445 VTTKDMRICGALGPVVSLRQKNDIVSETEIGEGGTYMWKTSTVTNKTCVSFFFHVSNEQNRKPQP 509

  Fly   481 QGGRGCIQFITQYQHPSGQRRIRVTTLARNWADATSNVHHISAGFDQEAAAVLMARMVVYRAETD 545
             |....|||||:|::.:|..|.||||:||.|....|  ..||:.||||.||.:|||:.:.|||..
plant   510 -GSAFFIQFITRYRYGNGAMRKRVTTVARRWVAGKS--PEISSSFDQETAASVMARLAINRAEEC 571

  Fly   546 EGPDILRWVDRQLIRLCQKFGEYSKDDPNSFRLSQNFSLFPQFMYHLRRSQFLQVFNNSPDETTF 610
            ...|::.|:|..|||...:||:|.::||:||||:.||||:||||::|||||||.|||||||||.|
plant   572 HARDVITWLDNGLIRFASRFGDYIQEDPSSFRLTPNFSLYPQFMFYLRRSQFLDVFNNSPDETGF 636

  Fly   611 YRHMLMREDLTQSLIMIQPILYSYSFNGPPEPVLLDTASIQADRILLMDTFFQILIYHGETIAQW 675
            :|.||.||.:..|:|||||.|..|||:|||.|||||..|:..|.|||.|::|.::|:||..||||
plant   637 FRLMLNREGVVNSIIMIQPTLLRYSFDGPPVPVLLDIRSVTPDVILLFDSYFYVVIHHGSKIAQW 701

  Fly   676 RALKYQDMPEYENFKQLLQAPVDDAQEILQTRFPMPRYIDTEHGGSQARFLLSKVNPSQTHNNMY 740
            |.|:|...|.:|.|:.||:||..||.:::..|.||||.:..:..||||||||:|:|||.|....:
plant   702 RKLEYHKDPSHETFRNLLEAPEIDAAQLVTDRIPMPRIVRCDQHGSQARFLLAKLNPSVTQKTDH 766

  Fly   741 AYGQAPIGQVTVDGGAP-VLTDDVSLQLFMEHLKKLAV 777
            .            ||:. |||||:|||.|:|.|:.|||
plant   767 T------------GGSDIVLTDDMSLQDFLEDLQSLAV 792

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec23NP_001246932.1 PLN00162 12..779 CDD:215083 340/818 (42%)
zf-Sec23_Sec24 58..97 CDD:282641 19/38 (50%)
Sec23-like 126..396 CDD:238755 102/313 (33%)
Sec23_BS 409..512 CDD:285301 44/103 (43%)
Sec23_helical 530..623 CDD:282646 53/92 (58%)
Sec23_C 618..738 CDD:200443 63/119 (53%)
AT5G43670NP_568626.1 PLN00162 1..794 CDD:215083 340/818 (42%)
zf-Sec23_Sec24 53..88 CDD:282641 17/36 (47%)
vWFA 170..419 CDD:294047 97/266 (36%)
Sec23_BS 438..540 CDD:285301 44/102 (43%)
Sec23_helical 556..649 CDD:282646 53/92 (58%)
Sec23_C 644..764 CDD:200443 63/119 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 44 1.000 Domainoid score I4679
eggNOG 1 0.900 - - E1_COG5047
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53648
OrthoDB 1 1.010 - - D270617at2759
OrthoFinder 1 1.000 - - FOG0001309
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100992
Panther 1 1.100 - - O PTHR11141
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.790

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