DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec23 and AT3G23660

DIOPT Version :10

Sequence 1:NP_001246932.1 Gene:Sec23 / 40694 FlyBaseID:FBgn0262125 Length:781 Species:Drosophila melanogaster
Sequence 2:NP_001189956.1 Gene:AT3G23660 / 821946 AraportID:AT3G23660 Length:791 Species:Arabidopsis thaliana


Alignment Length:810 Identity:381/810 - (47%)
Similarity:511/810 - (63%) Gaps:70/810 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 EDRDGVRLTWNVWPSSRIEASRLVVPLACLYQPLKERPDLPPIQYEPVLCTRSNCRAILNPLCQV 76
            |..||||:||||||.|:.|||:.|:|||....|::...|:|.:.|.|:.|  ..|.|.||...||
plant    10 EGIDGVRMTWNVWPHSKAEASKCVIPLAACISPIRRHADIPTLPYAPLRC--RTCSAALNAYAQV 72

  Fly    77 DYRAKLWVCNFCFQRNPFPPQYAAISEQHQPAELIPGFSTIEYTITRAPTM--------PPVFIF 133
            |:.||||:|.||:|||.|||.|..|||.:.|.||.|.::|:|||:  .|.:        ||||:|
plant    73 DFTAKLWICPFCYQRNHFPPHYHVISETNLPGELYPQYTTVEYTL--PPPVANGEGLVDPPVFVF 135

  Fly   134 LVDTCMDEEELDALKDSLQMSLSLLPTNALVGLITFGKMIQVHELGAEGCSKSYVFRGTKDLTAK 198
            ::||||.|||||..|.:|:.::.|||.|||||.::||....|||||....||.:||:|.|:::..
plant   136 VLDTCMIEEELDFAKSALKQAIGLLPENALVGFVSFGTQAHVHELGFSEMSKVFVFKGDKEISKD 200

  Fly   199 QVQDMLGIG----RGAAPGPQQQQHLPGQPAGAAAPVPPAHRFLQPIGQCDAALGDLLSELQRDP 259
            |:.|.||:|    ||.:.|||.     |.|:..      .:|||.|..:|:..|..||.|||.|.
plant   201 QILDQLGLGGSSRRGGSKGPQN-----GFPSSG------LNRFLLPASECEFTLNSLLDELQSDQ 254

  Fly   260 WPVPQGKRYLRSTGAALSIAVGLLECTYPNTGGRIMTFVGGPCSQGPGQVVDDELKHPIRSHHDI 324
            |||..|.|..|.||.|||:|.|||....|.||.||:..:||||::|||.:|..:|..|:|||.|:
plant   255 WPVKPGHRSQRCTGVALSVAAGLLGACLPGTGARIVALIGGPCTEGPGTIVSKDLSDPVRSHKDL 319

  Fly   325 HKDNVRFMKKAIKHYDALALRAATNGHSVDIYSCALDQTGLLEMKQLCNSTGGHMVMGDSFNSSL 389
            .||...:.|||:|.||::|.:..|.||.:|:::.||||.|:.|||.....|||.:|:.:||..|:
plant   320 DKDAAPYYKKAVKFYDSIAKQLVTQGHVLDLFASALDQVGVAEMKVAVERTGGLVVLSESFGHSV 384

  Fly   390 FKQTFQRVFARDGRNDLKMAFNATLEVKCSRELKISGGIGSCVSLNVKSPSVSDVEIGMGNTVQW 454
            ||.:|:||| .||...|.:.||.|||:.||:::||.|.||.|.||..|..||:|..||.|||..|
plant   385 FKDSFKRVF-EDGDQALGLCFNGTLEICCSQDIKIQGAIGPCSSLEKKGASVADTVIGEGNTSAW 448

  Fly   455 KLCTLNPSSTVAYFFEV----VNQHAAPIPQGGRGCIQFITQYQHPSGQRRIRVTTLARNWADAT 515
            :||.|:.::.:..||::    .|...|..||   ..:||:|.||:|.||..:||||:.|.|.|:.
plant   449 RLCGLDKTTCLTIFFDISSSGSNTPGAANPQ---FYLQFLTSYQNPEGQTLLRVTTVCRQWIDSA 510

  Fly   516 SNVHHISAGFDQEAAAVLMARMVVYRAETD--------------------------EGPDILRWV 554
            .:...:..|||||.|||:|||:...:.|::                          ||.|..||:
plant   511 VSSEELVQGFDQETAAVVMARLASLKMESEVRHSRKLQFGVPRISNAYLFIQKRFKEGFDATRWL 575

  Fly   555 DRQLIRLCQKFGEYSKDDPNSFRLSQNFSLFPQFMYHLRRSQFLQVFNNSPDETTFYRHMLMRED 619
            ||.|||||.|||:|.||||.||.|:..|||||||:::||||||:||||||||||.::..:|.||:
plant   576 DRNLIRLCSKFGDYRKDDPASFTLNPYFSLFPQFIFNLRRSQFVQVFNNSPDETAYFCMLLNREN 640

  Fly   620 LTQSLIMIQPILYSYSFNGPPEPVLLDTASIQADRILLMDTFFQILIYHGETIAQWRALKYQDMP 684
            ::.:.:||||.|.:||||.|.||.|||.|||.||||||:|.:|.::::||.||||||.:.|...|
plant   641 ISNATVMIQPSLTTYSFNSPAEPALLDVASIAADRILLLDAYFSVVVFHGMTIAQWRNMGYHHQP 705

  Fly   685 EYENFKQLLQAPVDDAQEILQTRFPMPRYIDTEHGGSQARFLLSKVNPSQTHNNMYAYGQAPIGQ 749
            |::.|.:|||||.:|:|.|::.|||:||.:..:..||||||||:|:|||.|:||         ..
plant   706 EHQAFAELLQAPQEDSQMIVRERFPVPRLVVCDQHGSQARFLLAKLNPSATYNN---------AN 761

  Fly   750 VTVDGGAPVLTDDVSLQLFMEHLKKLAVST 779
            ....|...:.|||||||:|.|||:||.|.:
plant   762 EMSTGSDVIFTDDVSLQVFFEHLQKLVVQS 791

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec23NP_001246932.1 PLN00162 12..779 CDD:215083 381/808 (47%)
AT3G23660NP_001189956.1 PLN00162 7..791 CDD:215083 381/808 (47%)

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