DRSC/TRiP Functional Genomics Resources

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Protein Alignment MTA1-like and Rere

DIOPT Version :9

Sequence 1:NP_001262293.1 Gene:MTA1-like / 40693 FlyBaseID:FBgn0027951 Length:922 Species:Drosophila melanogaster
Sequence 2:XP_006539199.1 Gene:Rere / 68703 MGIID:2683486 Length:1569 Species:Mus musculus


Alignment Length:993 Identity:215/993 - (21%)
Similarity:351/993 - (35%) Gaps:274/993 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MYRVGDYVYVET-TPNSPYLIRRIEELNKNQTGNVEAKVMCFYRRRDLPNPLVQLADKHQLATAE 68
            :||.||.||:|: .||:||.|..|::...     |.:...|                        
Mouse   104 VYRPGDCVYIESRRPNTPYFICSIQDFKL-----VHSSQAC------------------------ 139

  Fly    69 DSPLATKLKKTWLRTPVSEEQAAQAVLDPSIAALDEERTSPTQTS----GGGGSATGNSGSNSSG 129
                        .|:|      |.|..||...:|......|...|    |.|||...:...|...
Mouse   140 ------------CRSP------APAFCDPPACSLPVAPQPPQHLSEAGRGPGGSKRDHLLMNVKW 186

  Fly   130 TSNNNSSSTAIGGGAGGSGGAGGDAEKGEALTSKQRYQIKHRELFLSRQVESIPATQIRGKCSVT 194
            ....:....::............|:.:...:|..   .||:||||:|..|::..|..:||||:::
Mouse   187 YYRQSEVPDSVYQHLVQDRHNENDSGRELVITDP---VIKNRELFISDYVDTYHAAALRGKCNIS 248

  Fly   195 LLNETESLQSYLNKDDTFFYCLVFDPNQKTLLADKGEIRVGSRYQCDIPAKLKDTATDDRKLEEL 259
            ..::..:.:.:..:.|:|||.|.::|..:.|.:.:||||||..:|..:|......:.|...:.:.
Mouse   249 HFSDIFAAREFKARVDSFFYILGYNPETRRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQH 313

  Fly   260 ESLVWTPEHSLTDRKIDQFLVVSRSIGTFARALDCSSSVKQPSLHMSAAAASRDITLFHAMNILH 324
            |.|||.|  .::|..:..:|..:||:..||...|..|:      .....|||||.|..:|:|.||
Mouse   314 EELVWMP--GVSDCDLLMYLRAARSMAAFAGMCDGGST------EDGCVAASRDDTTLNALNTLH 370

  Fly   325 KHEYSIEESMSSLVPSTGPVLCRDEIED-WSASEANLFEEALEKYGKDFNDIRQDFLPWKTLKQI 388
            :..|...:::..||....|.|    ||. |:..|...|.:.|.:|||:|..||::.||.|...::
Mouse   371 ESSYDAGKALQRLVKKPVPKL----IEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPSKETGEL 431

  Fly   389 IEYYYMWKTT-----DRYVQQKRVKAVEAELKLKQVYIPQYNNNGKGNGTSTKAGGGIYNGTTNG 448
            |.:||.||.|     .|..::.|.:||...:|.:....|.       |..|........:.::..
Mouse   432 ITFYYYWKKTPEAASSRAHRRHRRQAVFRRIKTRTASTPV-------NTPSRPPSSEFLDLSSAS 489

  Fly   449 STDLSS-------NGKPCESCGTTKSSQWNSVSSGHSTSRLCLSCWEYWRRYGSM---------- 496
            ..|..|       .|..|..|.||.|..|:  ..|.....||..|..::::||.:          
Mouse   490 EDDFDSEDSEQELKGYACRHCFTTTSKDWH--HGGRENILLCTDCRIHFKKYGELPPIEKPVDPP 552

  Fly   497 -------KSATKGDAGEGDAKKKSSSAASTPTATLAGLATTPTA----VVDLNDDEKISDLTNRQ 550
                   |....|.:|:...:.:.|..:...:...:|....||:    ...:|:|.:        
Mouse   553 PFMFKPVKEEDDGLSGKHSMRTRRSRGSGQMSTLRSGRKKQPTSPDGRASPINEDIR-------- 609

  Fly   551 LHRCSIVNCGKEFKLKTHLARHYAQAHGIAISSGSPRPIMKTRTAFYLHTNPMTRVARAICRSIV 615
                                           |||...|...:.::.......:.:.|:.:.....
Mouse   610 -------------------------------SSGRNSPSAASTSSNDSKAETVKKSAKKVKEEAA 643

  Fly   616 KPKKAARQSAYAINAMLVKQEFTNRISGK-------------SQAEIKKLLLLKPKDRGSV---- 663
            .|.|:.::....:.:   ..|.|:||:.|             |:.|.:........|.||.    
Mouse   644 SPLKSTKRQREKVAS---DTEDTDRITSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKD 705

  Fly   664 TKIANRLGAPGSGPHEWLVLTPKDK-------------MPLPAVVSFPK-----PPKAPDGSLVY 710
            ....||..:|.       :.:|:|.             ...|..:..|.     |..||.|:   
Mouse   706 IDQDNRSTSPS-------IPSPQDNESDSDSSAQQQMLQAQPPALQAPSGAASAPSTAPPGT--- 760

  Fly   711 DRVPNK--SPDVVAVP--ADKELTIIPTQATSTIRKRAHEDQQLNGTEVTIVPSGPPAKRPNKDP 771
            .::|.:  :|...|||  .....:..|.|..||:...||       |.:...|:..|.:.|:..|
Mouse   761 PQLPTQGPTPSATAVPPQGSPATSQPPNQTQSTVAPAAH-------THIQQAPTLHPPRLPSPHP 818

  Fly   772 --MPSHCPSPEQFAAMMAASGQPLSRHHLNGKQKIAQMARGGNGRKQVISWMDAPDDVYFRANDT 834
              .|...| |.|      :|.||..:..|:        ::|..|...:                 
Mouse   819 PLQPMTAP-PSQ------SSAQPHPQPSLH--------SQGPPGPHSL----------------- 851

  Fly   835 HKKTRKILSAVDLRRAARKPWRTLPI--KPAAPEP---SSRPIESQIVILDXPSPASTLTASAAS 894
                                 :|.|:  .|..|:|   .|:|.:.|..:   ||||    |:...
Mouse   852 ---------------------QTGPLLQHPGPPQPFGLPSQPSQGQGPL--GPSPA----AAHPH 889

  Fly   895 ATKLLSSSASRFEQQHPP 912
            :|..|.:|.|..:.|.||
Mouse   890 STIQLPASQSALQPQQPP 907

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MTA1-likeNP_001262293.1 BAH_MTA 3..253 CDD:240060 59/252 (23%)
ELM2 232..284 CDD:279754 14/51 (27%)
SANT_MTA3_like 352..397 CDD:212559 17/45 (38%)
SANT 353..398 CDD:197842 18/44 (41%)
ZnF_GATA 458..508 CDD:238123 15/66 (23%)
RereXP_006539199.1 BAH_MTA 102..307 CDD:240060 59/252 (23%)
ELM2 286..336 CDD:366648 14/51 (27%)
SANT_MTA3_like 395..440 CDD:212559 17/44 (39%)
ZnF_GATA 503..552 CDD:214648 13/50 (26%)
Atrophin-1 568..1568 CDD:367360 81/458 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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