DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MTA1-like and rerea

DIOPT Version :9

Sequence 1:NP_001262293.1 Gene:MTA1-like / 40693 FlyBaseID:FBgn0027951 Length:922 Species:Drosophila melanogaster
Sequence 2:XP_005162258.1 Gene:rerea / 569081 ZFINID:ZDB-GENE-060718-1 Length:1531 Species:Danio rerio


Alignment Length:1024 Identity:221/1024 - (21%)
Similarity:355/1024 - (34%) Gaps:332/1024 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MYRVGDYVYVET-TPNSPYLIRRIEELNKNQTGNVEAKVMCFYRRRDLPNPLVQLADKHQLATAE 68
            :||.||.||:|: .||:||.|..|::...::..::...|..:||:.::|:.:.|    |      
Zfish   103 VYRPGDCVYIESRRPNTPYFICSIQDFKLSKRDHLLMNVKWYYRQSEVPDSVYQ----H------ 157

  Fly    69 DSPLATKLKKTWLRTPVSEEQAAQAVLDPSIAALDEERTSPTQTSGGGGSATGNSGSNSSGTSNN 133
                                             |.::|                        :|.
Zfish   158 ---------------------------------LVQDR------------------------NNE 165

  Fly   134 NSSSTAIGGGAGGSGGAGGDAEKGEALTSKQRYQIKHRELFLSRQVESIPATQIRGKCSVTLLNE 198
            |.|...:                  .:|..   .:|.||||:|..|::..|..:||||:::..::
Zfish   166 NDSGREL------------------VITDP---VVKSRELFISDYVDTYHAAALRGKCNISHFSD 209

  Fly   199 TESLQSYLNKDDTFFYCLVFDPNQKTLLADKGEIRVGSRYQCDIPAKLKDTATDDRKLEELESLV 263
            ..:.:.:..:.|:|||.|.::|..:.|.:.:||||||..:|..:|......:...:.:.|.|.||
Zfish   210 IFAAREFKARIDSFFYILGYNPETRRLNSTQGEIRVGPSHQAKLPELQPFPSPGGQTVTENEELV 274

  Fly   264 WTPEHSLTDRKIDQFLVVSRSIGTFARALDCSSSVKQPSLHMSAAAASRDITLFHAMNILHKHEY 328
            |.|  .:.|..:..:|..:||:..||...|..|:      .....|||||.|..:|:|.||:..|
Zfish   275 WMP--GVNDCDLLMYLRAARSMAAFAGMCDGGST------EDGCLAASRDDTTLNALNTLHESSY 331

  Fly   329 SIEESMSSLVPSTGPVLCRDEIED-WSASEANLFEEALEKYGKDFNDIRQDFLPWKTLKQIIEYY 392
            ...:::..||....|.|    ||. ||..|...|.:.|.:|||:|..||::.||.|...::|.:|
Zfish   332 DAGKALQRLVKKPVPKL----IEKCWSEDEVKRFIKGLRQYGKNFFRIRKELLPNKETGELITFY 392

  Fly   393 YMWKTTD-----RYVQQKRVKAVEAELKLKQVYIPQYNNNGKGNGTSTKAGGGIYNGTTNGSTDL 452
            |.||.|.     |..::.|.:.|...:|.:....|.       |..|........:.::....|.
Zfish   393 YYWKKTPEAASCRAHRRHRRQPVFRRIKTRTASTPV-------NTPSRPPSSEFLDLSSASEDDF 450

  Fly   453 SS-------NGKPCESCGTTKSSQWNSVSSGHSTSRLCLSCWEYWRRYGSM-------------- 496
            .|       .|..|..|.||.|..|:  ..|.....||..|..::::||.:              
Zfish   451 DSEDSEQELKGYACRHCFTTTSKDWH--HGGRENILLCTDCRIHFKKYGELPPIEKPVDPPPFMF 513

  Fly   497 ---KSATKGDAGEGDAK-KKSSSAAST-------PTATLAGLATTPTAVVDLNDDEKISDLTNRQ 550
               |....|.:|:...: :::..:.||       .||:..|.| :||     |:|.:.|..|:..
Zfish   514 KPVKEEDDGLSGKHSMRTRRNRGSMSTLRSGRKKQTASPDGRA-SPT-----NEDLRSSGRTSPS 572

  Fly   551 LHRCSIVNCGKEFKLKTHLARHYAQAHGIAISSGSPRPIMKTRTAFYLHTNPMTRVARAICRSIV 615
            ....|..: .|...:|                    :|..||:..   ..:||....|...:...
Zfish   573 AASTSSTD-SKTDSMK--------------------KPSKKTKEE---APSPMKSAKRQREKGAS 613

  Fly   616 KPKKAARQSAYAINAMLVKQEFTNRIS---------GKSQAE------IKKLLLLKPKDRGSVTK 665
            ..:::.|.||        |:..|..||         |:.:.|      :.......|||...   
Zfish   614 DTEESERASA--------KKSKTQEISVPNSPSECEGEGEGESSDGRSVNDEGSSDPKDIDQ--- 667

  Fly   666 IANRLGAPG--------------------SGPHEWLV------LTPKDKMPLPAVVSFPKP---- 700
             .||..:|.                    .|.|..::      |.|   .|.||..:...|    
Zfish   668 -DNRSSSPSIPSPRDNESDSDSSAQQQILQGQHPPVIQCQTGTLPP---APPPAAAASTTPTSGA 728

  Fly   701 --------PKAPDGSLVYDRVPNKSPDVVAVPADKELTIIPTQATSTIRKRAHEDQQLNGTEVTI 757
                    |..|..|:...::|...|          |::|    .|.:::.......|.|     
Zfish   729 PSLSSQPSPSIPPTSMPPQQIPPAGP----------LSLI----QSGVQRLPSPHSPLQG----- 774

  Fly   758 VPSGPPAKR--------PNKDPM----------PSHCPSPEQFAAM---MAASGQPLSRHHLNGK 801
            :|..||..:        |...||          |||.|.|......   ||.|..|.|  .|:|:
Zfish   775 MPQPPPPSQTCPQALQPPLHGPMPPMGHPLQAGPSHMPHPHALPTQPFPMAQSQVPPS--PLSGQ 837

  Fly   802 QKIAQMARGGNGRKQVISWMDAPDDVYFRANDTHKKTRKILSAVDLRRAARKPWRTLPIKPA-AP 865
            .:.|.           :|....|          |....:..|:   .::..:|.|..|:.|| .|
Zfish   838 AQAAS-----------LSQQQRP----------HTPPSQSQSS---SQSGSQPPREQPLPPAPLP 878

  Fly   866 EPSSRPIESQIVILDXPSPASTLTASAASATKLLSSSASRFEQQHPPFP 914
            .|..:|..:      .|.|.             :.::.|.....|||||
Zfish   879 MPHIKPPPT------TPIPQ-------------MPNAQSHKHPSHPPFP 908

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MTA1-likeNP_001262293.1 BAH_MTA 3..253 CDD:240060 52/248 (21%)
ELM2 232..284 CDD:279754 14/51 (27%)
SANT_MTA3_like 352..397 CDD:212559 18/45 (40%)
SANT 353..398 CDD:197842 19/44 (43%)
ZnF_GATA 458..508 CDD:238123 15/66 (23%)
rereaXP_005162258.1 BAH_MTA 101..264 CDD:240060 52/248 (21%)
ELM2 243..293 CDD:307553 14/51 (27%)
SANT_MTA3_like 352..397 CDD:212559 18/44 (41%)
ZnF_GATA 460..509 CDD:214648 13/50 (26%)
Atrophin-1 525..1530 CDD:331285 94/493 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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