DRSC/TRiP Functional Genomics Resources

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Protein Alignment MTA1-like and CG1620

DIOPT Version :9

Sequence 1:NP_001262293.1 Gene:MTA1-like / 40693 FlyBaseID:FBgn0027951 Length:922 Species:Drosophila melanogaster
Sequence 2:NP_001260777.1 Gene:CG1620 / 35678 FlyBaseID:FBgn0033183 Length:586 Species:Drosophila melanogaster


Alignment Length:531 Identity:129/531 - (24%)
Similarity:210/531 - (39%) Gaps:142/531 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 VSEEQA-----AQAVLDPSIAALDEERTSPTQ----TSGGGGSATGNSGSNSSGTSNNNSS---- 136
            ::||:|     |.:..| .||.|.||...|.:    ..||..::...|.||.||:|:..:.    
  Fly    86 LNEEEALADMEAHSAED-EIATLREESEMPIEELLAKYGGTAASPAMSSSNRSGSSSRRARRATK 149

  Fly   137 ------STAIGGGAGGSGGAGGDAEKGEALTSKQRYQIKHRELFLSRQVESIPATQIRGKCSVTL 195
                  .|.:...:..:..:....||.:.:  .|..:.|.....|:...||..|:.:        
  Fly   150 RQYQELDTEMAHTSTSTSSSTSQLEKHDGI--DQEEEPKEEADKLASPPESGEASSV-------- 204

  Fly   196 LNETESLQSY-------------LNKDDTFFYCLV--------FDPNQKTLL----ADKGE---- 231
              :||..|.|             |..|::|.....        |.|.| ||.    |::.|    
  Fly   205 --DTEDAQKYEGIKKQHRSHLLDLYPDESFVDLAPTCGEETERFTPLQ-TLFDEVEAEEEEESES 266

  Fly   232 --------IRVGSRYQCDIPAKLKDTATDDRKLEELESLVWTPEHSLTDRKIDQFLV---VSRSI 285
                    |.||..||.:||..|.... |....|..:.|:|.|. .:::|:::::|.   .:|||
  Fly   267 ELDDARKIIMVGHDYQAEIPEGLSQYG-DILPYENEDQLIWEPS-QVSEREVEEYLAKIQETRSI 329

  Fly   286 -----GTFARALD---CSSSVKQPSLHMSAAAASRDITLF---------------HAMNILHKHE 327
                 |:...|.:   .:.:..:|...::|.|......|.               .|:::|.:..
  Fly   330 VPPDDGSETTAGEEGAATGATIEPPAPITAPATPPRAPLATSGAGDQELVVKDNEQALHLLVQCG 394

  Fly   328 YSIEESM----SSLVPSTGPVLCRDEIEDWSASEANLFEEALEKYGKDFNDIRQDFLPWKTLKQI 388
            |..:|::    .:::|.|      |.:..||..|...|||.::::||||..|||:.:..:|::::
  Fly   395 YDFKEALRRKRMNVLPLT------DTMSSWSEDECLKFEEGIQRFGKDFYQIRQNQVRTRTMREL 453

  Fly   389 IEYYYMWKTTDRYVQQKRVKAVEAELKLKQVYIPQYNNNGKGNGTSTKAGGGIYNGTTNGSTDLS 453
            :.:||:||.::|..|.   .|:...:....|:|   |..|.|||:....|.||.:||.|      
  Fly   454 VHFYYLWKKSERRDQS---FALNDTIDHMDVFI---NEAGGGNGSGNGNGAGIVSGTAN------ 506

  Fly   454 SNGKPCESCGTTKSSQWNSVSSGHSTSRLCLSCWEYWRRYGSMKSATK------GDAGEGD---A 509
            |||    ||....       |:|||...  ||..|........|.|:|      |....|:   .
  Fly   507 SNG----SCSPHS-------SNGHSNGD--LSALEKDTIASPRKPASKSYSIMTGSQAVGNPSGG 558

  Fly   510 KKKSSSAASTP 520
            .:|..|:||.|
  Fly   559 NRKRCSSASLP 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MTA1-likeNP_001262293.1 BAH_MTA 3..253 CDD:240060 50/223 (22%)
ELM2 232..284 CDD:279754 15/54 (28%)
SANT_MTA3_like 352..397 CDD:212559 17/44 (39%)
SANT 353..398 CDD:197842 18/44 (41%)
ZnF_GATA 458..508 CDD:238123 13/55 (24%)
CG1620NP_001260777.1 ELM2 275..320 CDD:279754 14/46 (30%)
SANT 417..463 CDD:197842 18/45 (40%)
SANT_MTA3_like 417..462 CDD:212559 17/44 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450192
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10865
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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