DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31546 and hdhA

DIOPT Version :10

Sequence 1:NP_730973.1 Gene:CG31546 / 40691 FlyBaseID:FBgn0051546 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_416136.1 Gene:hdhA / 946151 ECOCYCID:EG10425 Length:255 Species:Escherichia coli


Alignment Length:257 Identity:79/257 - (30%)
Similarity:131/257 - (50%) Gaps:22/257 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LDFSGKVVLITGAASGIGAAAAEMFSKLGACLALVDREEEGLICVMKRCMKMGHEPYGIAGDLLK 73
            |...||..:||||.:|||...|..|:..||.:.:.|...:....|:....::|.:.:....|:..
E. coli     7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITS 71

  Fly    74 PPEIECIARKTTERYEGKLDVLVNGAG-------IMPTGTLQSTELACFTHVMEANVRSGFYLTK 131
            ..|:..:|.....:. ||:|:|||.||       .||        :|.|....|.||.|.|:|::
E. coli    72 EQELSALADFAISKL-GKVDILVNNAGGGGPKPFDMP--------MADFRRAYELNVFSFFHLSQ 127

  Fly   132 LLLPQLLQCKGSIV-NVSSVCGLRAFPNLVAYNMSKAAVDQFTRSLALDLGPQGVRVNAVNPGVI 195
            |:.|::.:..|.:: .::|:.......|:.:|..||||.....|::|.|||.:.:|||.:.||.|
E. coli   128 LVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAI 192

  Fly   196 RTNLQKAGGMDEQSYAEFLEHSKKTHALGRIGEPKEVAAAICFLASELASFVTGVTLPVDGG 257
            .|:..|: .:..:...:.|:|:    .:.|:|:|:::|.|..||.|..||:|:|..|.|.||
E. coli   193 LTDALKS-VITPEIEQKMLQHT----PIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGG 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31546NP_730973.1 Rossmann-fold NAD(P)(+)-binding proteins 11..261 CDD:473865 78/255 (31%)
hdhANP_416136.1 PRK06113 1..255 CDD:135765 79/257 (31%)

Return to query results.
Submit another query.