DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31546 and Rdh8

DIOPT Version :10

Sequence 1:NP_730973.1 Gene:CG31546 / 40691 FlyBaseID:FBgn0051546 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001162065.1 Gene:Rdh8 / 690953 RGDID:1589829 Length:312 Species:Rattus norvegicus


Alignment Length:264 Identity:76/264 - (28%)
Similarity:114/264 - (43%) Gaps:45/264 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VLITGAASGIGAAAAEMFSKLGACLALVDREEEGLICVMKRCMKMGHEPYGIA-----GDLLKPP 75
            |||:|.:||||.       :|...||...|:...::..|:...|  .||...|     |..|...
  Rat     8 VLISGCSSGIGL-------ELAVQLAHDPRQRYQVVATMRDLGK--KEPLEAAAGEALGKTLSVA 63

  Fly    76 EIE-CIARKTTERYE----GKLDVLVNGAGIMPTGTLQSTELACFTHVMEANVRSGFYLTKLLLP 135
            ::: |.....|....    |::|:|||.||:...|.|:...||...:|...|......|.|.:||
  Rat    64 QLDVCSDESVTNCLSHIEGGQVDILVNNAGVGLVGPLEDLSLATMQNVFNTNFFGAVRLVKAVLP 128

  Fly   136 QLLQCK-GSIVNVSSVCGLRAFPNLVAYNMSKAAVDQFTRSLALDLGPQGVRVNAVNPGVIRTNL 199
            .:.:.: |.||.||||.||:.......|..||.|::.|..|||:.|....:.::.|.||.:.|:.
  Rat   129 GMKRRRQGHIVVVSSVMGLQGVMFNDVYAASKFALEGFFESLAIQLRQFNIFISMVEPGPVITDF 193

  Fly   200 QKAGGMDEQ-SYAEFLEHSKKTHALGR-------------IGE-PKEVAAAICFLASELASFVTG 249
            :  |.:..| |..||.:...:|....|             :|: |::||..|        :.|.|
  Rat   194 E--GKLLAQVSKTEFPDTDPETLGYFRDLYLPASRELFRSVGQSPRDVAQVI--------AKVIG 248

  Fly   250 VTLP 253
            .|.|
  Rat   249 STRP 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31546NP_730973.1 Rossmann-fold NAD(P)(+)-binding proteins 11..261 CDD:473865 76/264 (29%)
Rdh8NP_001162065.1 Rossmann-fold NAD(P)(+)-binding proteins 8..262 CDD:473865 76/264 (29%)

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