DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31546 and RDH8

DIOPT Version :10

Sequence 1:NP_730973.1 Gene:CG31546 / 40691 FlyBaseID:FBgn0051546 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_056540.3 Gene:RDH8 / 50700 HGNCID:14423 Length:311 Species:Homo sapiens


Alignment Length:268 Identity:69/268 - (25%)
Similarity:109/268 - (40%) Gaps:76/268 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KVVLITGAASGIGAAAAEMFSKLGACLALVDREEEGLICVMKRCMKMGHEP---YGIAG---DLL 72
            :.|||:|.:||||                           ::..:::.|:|   |.:..   ||.
Human     6 RTVLISGCSSGIG---------------------------LELAVQLAHDPKKRYQVVATMRDLG 43

  Fly    73 KPPEIECIARKTTER---------------------YEGKLDVLVNGAGIMPTGTLQSTELACFT 116
            |...:|..|.:...:                     .:|::|||||.||:...|.|:...||...
Human    44 KKETLEAAAGEALGQTLTVAQLDVCSDESVAQCLSCIQGEVDVLVNNAGMGLVGPLEGLSLAAMQ 108

  Fly   117 HVMEANVRSGFYLTKLLLPQLLQCK-GSIVNVSSVCGLRAFPNLVAYNMSKAAVDQFTRSLALDL 180
            :|.:.|......|.|.:||.:.:.: |.||.:|||.||:.......|..||.|::.|..|||:.|
Human   109 NVFDTNFFGAVRLVKAVLPGMKRRRQGHIVVISSVMGLQGVIFNDVYAASKFALEGFFESLAIQL 173

  Fly   181 GPQGVRVNAVNPGVIRTNLQKAGGMDEQ-SYAEF---------------LEHSKKTHALGRIGE- 228
            ....:.::.|.||.:.|..:  |.:..| |.|||               |..|:|...  .:|: 
Human   174 LQFNIFISLVEPGPVVTEFE--GKLLAQVSMAEFPGTDPETLHYFRDLYLPASRKLFC--SVGQN 234

  Fly   229 PKEVAAAI 236
            |::|..||
Human   235 PQDVVQAI 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31546NP_730973.1 Rossmann-fold NAD(P)(+)-binding proteins 11..261 CDD:473865 69/268 (26%)
RDH8NP_056540.3 type1_17beta-HSD-like_SDR_c 6..262 CDD:187666 69/268 (26%)

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