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Protein Alignment CG31546 and Cbr1

DIOPT Version :9

Sequence 1:	NP_730973.1	Gene:	CG31546 / 40691	FlyBaseID:	FBgn0051546	Length:	264	Species:	Drosophila melanogaster
Sequence 2:	NP_062043.1	Gene:	Cbr1 / 29224	RGDID:	2286	Length:	277	Species:	Rattus norvegicus

Alignment Length:	252	Identity:	66/252 - (26%)
Similarity:	99/252 - (39%)	Gaps:	60/252 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly    15 VVLITGAASGIG-AAAAEMFSKLGACLALVDREEEGLICVMKRCMKMGHEPYGIAGDLLKPPEIE 78
            |.|:|||..||| |...::..|....:.|..|:|......:|:....|..|.....|:..|..|.
  Rat     7 VALVTGANKGIGFAIVRDLCRKFLGDVVLTARDESRGHEAVKQLQTEGLSPRFHQLDIDNPQSIR 71

  Fly    79 CIARKTTERYEGKLDVLVNGAGIMPTGTLQSTELACFTHVMEANVRSGFYLT----KLLLPQLLQ 139
            .:.....:.| |.|:||||.|||    ..:..:...|....|..:::.|:.|    |.||| :::
  Rat    72 ALRDFLLQEY-GGLNVLVNNAGI----AFKVVDPTPFHIQAEVTMKTNFFGTQDVCKELLP-IIK 130

  Fly   140 CKGSIVNVSSVCGLRA------------------------------------------FPNLVAY 162
            .:|.:|||||...|||                                          :|| .||
  Rat   131 PQGRVVNVSSSVSLRALKSCSPELQQKFRSETITEEELVGLMNKFIEDAKKGVHAKEGWPN-SAY 194

  Fly   163 NMSKAAVDQFTRSLALDLGPQ----GVRVNAVNPGVIRTNLQKAGGMDEQSYAEFLE 215
            .::|..|...:|..|..|..:    .:.:||..||.:||::  ||....:|..|..|
  Rat   195 GVTKIGVTVLSRIYARKLNEERREDKILLNACCPGWVRTDM--AGPKATKSPEEGAE 249

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.