DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31546 and rdh8a

DIOPT Version :10

Sequence 1:NP_730973.1 Gene:CG31546 / 40691 FlyBaseID:FBgn0051546 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_957001.1 Gene:rdh8a / 280648 ZFINID:ZDB-GENE-021115-3 Length:318 Species:Danio rerio


Alignment Length:214 Identity:60/214 - (28%)
Similarity:103/214 - (48%) Gaps:27/214 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KVVLITGAASGIGAAAAEMFSKLGACLALVDREEEGLICVMK------RCMKMGHEPYGIAGDLL 72
            |||||||.:||||.       ::...||..:::...:|..|:      |.::...|.||....||
Zfish     8 KVVLITGCSSGIGL-------RIAVLLARDEQKRYHVIATMRDLKKKDRLVEAAGEVYGQTLTLL 65

  Fly    73 KPPEI-------ECIARKTTERYEGKLDVLVNGAGIMPTGTLQSTELACFTHVMEANVRSGFYLT 130
             |.:|       :|: ....:|:   :|||:|.||:...|.::|..:.....|.|.|......:.
Zfish    66 -PLDICSDESVRQCV-NSVKDRH---IDVLINNAGVGLLGPVESISMDEMKRVFETNFFGTVRMI 125

  Fly   131 KLLLPQLLQCK-GSIVNVSSVCGLRAFPNLVAYNMSKAAVDQFTRSLALDLGPQGVRVNAVNPGV 194
            |.::|.:.:.: |.|:.:|||.||:.......|..||.|::.|..|:|:.|....|:::.:.||.
Zfish   126 KEVMPDMKKRQAGHIIIMSSVMGLQGVVFNDVYTASKFAIEGFCESMAVQLLKFNVKLSLIEPGP 190

  Fly   195 IRTNLQKAGGMDEQSYAEF 213
            :.|..: ...|:|.:..|:
Zfish   191 VHTEFE-TKMMEEVAKMEY 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31546NP_730973.1 Rossmann-fold NAD(P)(+)-binding proteins 11..261 CDD:473865 60/214 (28%)
rdh8aNP_957001.1 type1_17beta-HSD-like_SDR_c 8..265 CDD:187666 60/214 (28%)

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