DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31546 and rbmx

DIOPT Version :10

Sequence 1:NP_730973.1 Gene:CG31546 / 40691 FlyBaseID:FBgn0051546 Length:264 Species:Drosophila melanogaster
Sequence 2:XP_004917002.1 Gene:rbmx / 100135403 XenbaseID:XB-GENE-5733378 Length:370 Species:Xenopus tropicalis


Alignment Length:69 Identity:15/69 - (21%)
Similarity:26/69 - (37%) Gaps:20/69 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ASGIGAAAAEMFSKLGACLALVDREEEGLICVMKRCMKMGHEPYGIAGDLLKPPEIECIARKTTE 86
            :||:|..|.            :.||.:|.....:|      :|.....|:...|..:..:.|  :
 Frog   149 SSGMGGRAP------------LSRERDGYGAPPRR------DPIPSRRDVYMSPRDDGYSGK--D 193

  Fly    87 RYEG 90
            ||:|
 Frog   194 RYDG 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31546NP_730973.1 Rossmann-fold NAD(P)(+)-binding proteins 11..261 CDD:473865 15/69 (22%)
rbmxXP_004917002.1 RRM_RBMX_like 7..86 CDD:409816
RBM1CTR 148..192 CDD:400429 11/60 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.