DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12171 and yohF

DIOPT Version :10

Sequence 1:NP_649563.1 Gene:CG12171 / 40690 FlyBaseID:FBgn0037354 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_416641.1 Gene:yohF / 949126 ECOCYCID:EG12019 Length:253 Species:Escherichia coli


Alignment Length:253 Identity:78/253 - (30%)
Similarity:136/253 - (53%) Gaps:22/253 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVIIVTGASSGIGAGTSVLLAKLGGLLTIVGRNLDK-LNETAEQIVAAGGAPALQVAADINSESD 70
            :|.|:|.:.||||...::|||:.|..:.|...:.:: ..:||.::|:.|      |.|:| .:.|
E. coli     3 QVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHG------VRAEI-VQLD 60

  Fly    71 VQGIVSATLA------KHGRIDVLVNNAGILELGSIENTSLEQFDRVMNTNVRSLYQLTHLVTPE 129
            :..:....||      :.|||||||||||.:......:.:.:::.::...:|...:..:.:...:
E. coli    61 LGNLPEGALALEKLIQRLGRIDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQ 125

  Fly   130 LIK--TKGNIVNVSSVNGIRSFPGVLAYNVSKAAVDQFTRCVALELAPKGVRVNSVNPGVIITEL 192
            ::|  ..|.|:|::||:.....|...||..:|.|:...|:.:||||....:.||:|.||.|.|.:
E. coli   126 MVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALELVRHKILVNAVAPGAIATPM 190

  Fly   193 QRRGGLDQEAYVKFLEHAKVTHALGRPGEVKEVAAAIAFLASDEASFSTGISLPVDGG 250
               .|:| ::.||  ..|:.:..|.|.|...|:|:.:.:|.|:.|:::||.||.||||
E. coli   191 ---NGMD-DSDVK--PDAEPSIPLRRFGATHEIASLVVWLCSEGANYTTGQSLIVDGG 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12171NP_649563.1 Rossmann-fold NAD(P)(+)-binding proteins 4..254 CDD:473865 78/253 (31%)
yohFNP_416641.1 PRK12743 1..253 CDD:237187 78/253 (31%)

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