DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12171 and bdcA

DIOPT Version :10

Sequence 1:NP_649563.1 Gene:CG12171 / 40690 FlyBaseID:FBgn0037354 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_418670.1 Gene:bdcA / 948765 ECOCYCID:G7880 Length:237 Species:Escherichia coli


Alignment Length:260 Identity:76/260 - (29%)
Similarity:122/260 - (46%) Gaps:38/260 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPSFKDKVIIVTGASSGIGA---------GTSVLLAKLGGLLTIVGRNLDKLNETAEQIVAAGGA 56
            |.:|..|.:::.|.|.||||         |.:|.....|.            .:.|:::....||
E. coli     1 MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGS------------KDAAKRLAQETGA 53

  Fly    57 PALQV-AADINSESDVQGIVSATLAKHGRIDVLVNNAGILELGSIENTSLEQFDRVMNTNVRSLY 120
            .|:.. :||.::..||       :.|.|.:|:||.||||...|.....:.:..||:...|:.:.|
E. coli    54 TAVFTDSADRDAVIDV-------VRKSGALDILVVNAGIGVFGEALELNADDIDRLFKINIHAPY 111

  Fly   121 QLTHLVTPELIKTKGNIVNVSSVNGIR-SFPGVLAYNVSKAAVDQFTRCVALELAPKGVRVNSVN 184
            ..: :.....:...|.|:.:.||||.| ...|:.||..||:|:....|.:|.:..|:|:.:|.|.
E. coli   112 HAS-VEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQ 175

  Fly   185 PGVIITELQRRGGLDQEAYVKFLEHAKVTHALGRPGEVKEVAAAIAFLASDEASFSTGISLPVDG 249
            ||.|.|:.....|     .::.:.|:.:  |:.|.|:.:|||..:|:||..||||.||....:||
E. coli   176 PGPIDTDANPANG-----PMRDMLHSLM--AIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDG 233

  Fly   250  249
            E. coli   234  233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12171NP_649563.1 Rossmann-fold NAD(P)(+)-binding proteins 4..254 CDD:473865 75/257 (29%)
bdcANP_418670.1 PRK12742 1..237 CDD:183714 76/260 (29%)

Return to query results.
Submit another query.