DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12171 and ygcW

DIOPT Version :10

Sequence 1:NP_649563.1 Gene:CG12171 / 40690 FlyBaseID:FBgn0037354 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_417254.4 Gene:ygcW / 947232 ECOCYCID:G7440 Length:261 Species:Escherichia coli


Alignment Length:250 Identity:76/250 - (30%)
Similarity:124/250 - (49%) Gaps:9/250 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SFKDKVIIVTGASSGIGAGTSVLLAKLGGLLTIVGRNLDKLNETAEQIVAAG-GAPALQVAADIN 66
            |.|.|..||||.:||:|...::.|||.|..:.|.....|. .||.|.|...| ....:||.  |.
E. coli    15 SLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDN-GETKEMIEKQGVEVDFMQVG--IT 76

  Fly    67 SESDVQGIVSATLAKHGRIDVLVNNAGILELGSIENTSLEQFDRVMNTNVRSLYQLTHLVTPELI 131
            :|...|.|::|...:.|.:|:|||||||.:|..:.:.....:|.:::.|:.:.::|::.....:|
E. coli    77 AEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMI 141

  Fly   132 KTK-GNIVNVSSVNGIRSFPGVLAYNVSKAAVDQFTRCVALELAPKGVRVNSVNPGVIITELQRR 195
            ..| |.|:|:.|:..........||:.:|.|:..||:....||....::||.:.||...|::...
E. coli   142 PQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLA 206

  Fly   196 GGLDQEAYVKFLEHAKVTHALGRPGEVKEVAAAIAFLASDEASFSTGISLPVDGG 250
            ...:.|...:.|:|...    .|.|:.:::..|..||||..:::..|..|.||||
E. coli   207 TRSNPETNQRVLDHIPA----NRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGG 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12171NP_649563.1 Rossmann-fold NAD(P)(+)-binding proteins 4..254 CDD:473865 74/248 (30%)
ygcWNP_417254.4 Ga5DH-like_SDR_c 14..260 CDD:187605 75/249 (30%)

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