DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12171 and CBR3

DIOPT Version :10

Sequence 1:NP_649563.1 Gene:CG12171 / 40690 FlyBaseID:FBgn0037354 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_001227.1 Gene:CBR3 / 874 HGNCID:1549 Length:277 Species:Homo sapiens


Alignment Length:258 Identity:57/258 - (22%)
Similarity:103/258 - (39%) Gaps:63/258 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVIIVTGASSGIG-AGTSVLLAKLGGLLTIVGRNLDKLNETAEQIVAAGGAPALQVAADINSESD 70
            :|.:||||:.||| |....|..:..|.:.:..|::.:.....:|:.|.|.:|... ..||:....
Human     6 RVALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFH-QLDIDDLQS 69

  Fly    71 VQGIVSATLAKHGRIDVLVNNAGILELGSIENTSLEQFD----RVMNTNVRSLYQLTHLVTPELI 131
            ::.:......::|.::||||||.:    :.::.....||    ..:.||..:...:.:.:.| ::
Human    70 IRALRDFLRKEYGGLNVLVNNAAV----AFKSDDPMPFDIKAEMTLKTNFFATRNMCNELLP-IM 129

  Fly   132 KTKGNIVNVSSVNGIRSF-----------------PGVLA------------------------Y 155
            |..|.:||:||:..:|:|                 .|.|.                        |
Human   130 KPHGRVVNISSLQCLRAFENCSEDLQERFHSETLTEGDLVDLMKKFVEDTKNEVHEREGWPNSPY 194

  Fly   156 NVSKAAVDQFTRCVALELAPK----GVRVNSVNPGVIITELQRRG-------GLDQEAYVKFL 207
            .|||..|...:|.:|..|..|    .:.||:..||.:.|::..:.       |.:...|:..|
Human   195 GVSKLGVTVLSRILARRLDEKRKADRILVNACCPGPVKTDMDGKDSIRTVEEGAETPVYLALL 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12171NP_649563.1 Rossmann-fold NAD(P)(+)-binding proteins 4..254 CDD:473865 57/258 (22%)
CBR3NP_001227.1 carb_red_PTCR-like_SDR_c 6..277 CDD:187585 57/258 (22%)

Return to query results.
Submit another query.