DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12171 and AT1G54870

DIOPT Version :10

Sequence 1:NP_649563.1 Gene:CG12171 / 40690 FlyBaseID:FBgn0037354 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_001322466.1 Gene:AT1G54870 / 841926 AraportID:AT1G54870 Length:337 Species:Arabidopsis thaliana


Alignment Length:259 Identity:80/259 - (30%)
Similarity:124/259 - (47%) Gaps:16/259 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PS--FKDKVIIVTGASSGIGAGTSVLLAKLGGLLT---IVGRNLDKLNETAE---QIVAAGGAPA 58
            ||  .:.||.::||..||||.......|..|..:.   :.|:......||.:   ::..:.....
plant    80 PSNKLRGKVALITGGDSGIGRAVGYCFASEGATVAFTYVKGQEEKDAQETLQMLKEVKTSDSKEP 144

  Fly    59 LQVAADINSESDVQGIVSATLAKHGRIDVLVNNAG-ILELGSIENTSLEQFDRVMNTNVRSLYQL 122
            :.:..|:..:.:.:.:|...:...||||||:|||. ..|..:||.....:.:||..||:.|.:.|
plant   145 IAIPTDLGFDENCKRVVDEVVNAFGRIDVLINNAAEQYESSTIEEIDEPRLERVFRTNIFSYFFL 209

  Fly   123 THLVTPELIKTKGNIVNVSSVNGIRSFPGVLAYNVSKAAVDQFTRCVALELAPKGVRVNSVNPGV 187
            |......: |...:|:|.:|||..:....:|.|..:|.|:..|||.:||:||.||:|||.|.||.
plant   210 TRHALKHM-KEGSSIINTTSVNAYKGNASLLDYTATKGAIVAFTRGLALQLAEKGIRVNGVAPGP 273

  Fly   188 IITELQRRGGLDQEAYVKFLEHAKVTHALGRPGEVKEVAAAIAFLASDE-ASFSTGISLPVDGG 250
            |.|.| .....::|....|....    .:.|.|:..|||.:..|||.:. :|:.||..|..:||
plant   274 IWTPL-IPASFNEEKIKNFGSEV----PMKRAGQPIEVAPSYVFLACNHCSSYFTGQVLHPNGG 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12171NP_649563.1 Rossmann-fold NAD(P)(+)-binding proteins 4..254 CDD:473865 78/255 (31%)
AT1G54870NP_001322466.1 SDR_c1 61..336 CDD:187613 80/259 (31%)

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