DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12171 and AT3G01980

DIOPT Version :10

Sequence 1:NP_649563.1 Gene:CG12171 / 40690 FlyBaseID:FBgn0037354 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_001078090.1 Gene:AT3G01980 / 821069 AraportID:AT3G01980 Length:296 Species:Arabidopsis thaliana


Alignment Length:310 Identity:70/310 - (22%)
Similarity:124/310 - (40%) Gaps:83/310 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVIIVTGASSGIGAGTSVLLAKLGGLLTIVGRN------LDKLNETAEQIVAAGGAPALQVAADI 65
            |.:::|.....:....:..|||.|..|.::|..      :||:.::.|     |..||..:|.|:
plant     6 KRVLMTSNGDEVSRNIAFHLAKHGCKLVMMGNEGSLRSIVDKIRDSIE-----GAFPADVIALDM 65

  Fly    66 NSESDV--QGIVSATLAKHGRIDVLVNN---AGIL----------------------------EL 97
            .|:|:|  ...|.......|..|..:|:   .|::                            ::
plant    66 ESDSEVAFHAAVQKAWELSGHFDAFLNSYTYQGLICFLFFTTLPLMLLCVDHSFIQQSFFLAGKV 130

  Fly    98 GSIENTSLEQFDRVMNTNVRSLYQLTHLVTPELIK--TKGNIVNVSSV-NGIRS-FPGVLAYNVS 158
            ..|...|.::|.|:...|:.:.:.|...|...:..  :.|:||.:::: :|.|: :||..||..:
plant   131 QDILQVSQDEFHRITKINLTAPWFLLKAVATRMKDHGSGGSIVFMATIASGERALYPGADAYAST 195

  Fly   159 KAAVDQFTRCVALELAPKGVRVNSVNPGVIITELQRRGGLDQEAYVKFLEHAKVTHALGRPGE-- 221
            .||:.|..|..|:.|....:|||.::.|:         .||.|          .|.::||...  
plant   196 SAAIHQLVRASAMSLGKHKIRVNMISRGL---------HLDDE----------YTASVGRDRAQK 241

  Fly   222 -VKEVA-------------AAIAFLASDEASFSTGISLPVDGGRHAMCPR 257
             ||:.|             :.:.:|.||.:.|.||.::.|||.:....||
plant   242 LVKDAAPLGQWLNPDTDLYSTVIYLISDGSRFMTGTTVLVDGAQSLTRPR 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12171NP_649563.1 Rossmann-fold NAD(P)(+)-binding proteins 4..254 CDD:473865 68/305 (22%)
AT3G01980NP_001078090.1 FabG 21..287 CDD:440651 66/289 (23%)

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