DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12171 and AT2G29170

DIOPT Version :9

Sequence 1:NP_649563.1 Gene:CG12171 / 40690 FlyBaseID:FBgn0037354 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_180480.2 Gene:AT2G29170 / 817466 AraportID:AT2G29170 Length:107 Species:Arabidopsis thaliana


Alignment Length:85 Identity:24/85 - (28%)
Similarity:39/85 - (45%) Gaps:8/85 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IVTGASSGIGAGTSVLLAKLGGLLTIVGRNLDKLNETAEQIVAAGGAPALQVAADINS----ESD 70
            :|||.|.|:|......||.||..:....||..:|.|...:..|.|......| .|::|    |..
plant    22 LVTGGSKGLGEAVVEELAMLGARVHTCARNETQLQECVREWQAKGFEVTTSV-CDVSSRDQREKL 85

  Fly    71 VQGIVSATLAKHGRIDVLVN 90
            ::.:.|..   .|::::||:
plant    86 MENVASIF---QGKLNILVS 102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12171NP_649563.1 fabG 2..251 CDD:235975 24/85 (28%)
NADB_Rossmann 4..254 CDD:304358 24/85 (28%)
AT2G29170NP_180480.2 NADB_Rossmann 13..>101 CDD:304358 22/82 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0725
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000019
OrthoInspector 1 1.000 - - mtm990
orthoMCL 1 0.900 - - OOG6_101836
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.710

Return to query results.
Submit another query.