DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12171 and Hsd17b14

DIOPT Version :10

Sequence 1:NP_649563.1 Gene:CG12171 / 40690 FlyBaseID:FBgn0037354 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_001178040.1 Gene:Hsd17b14 / 691018 RGDID:1588673 Length:270 Species:Rattus norvegicus


Alignment Length:261 Identity:92/261 - (35%)
Similarity:131/261 - (50%) Gaps:33/261 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FKDKVIIVTGASSGIGAGTSVLLAKLGGLLTIVGRNLDKLNETAEQIV-----AAGGAPALQ--- 60
            :..||::|||.|.||||             .||...:|    :..|:|     .|||....|   
  Rat     7 YSGKVVVVTGGSRGIGA-------------AIVRAFVD----SGAQVVFCDKDEAGGRAVEQELL 54

  Fly    61 ----VAADINSESDVQGIVSATLAKHGRIDVLVNNAGILELGSI-ENTSLEQFDRVMNTNVRSLY 120
                :..|:..|.|:|.::|.|:::.|.:|.:|||||......: |.||.:.|.:::..|:...|
  Rat    55 GTVFIPGDVTQEGDLQTLISETVSRFGHLDCVVNNAGYHPPAQLPEETSAQGFRQLLEENLLGAY 119

  Fly   121 QLTHLVTPELIKTKGNIVNVSSVNGIRSFPGVLAYNVSKAAVDQFTRCVALELAPKGVRVNSVNP 185
            .|..|..|.|.|:||||:|:||:.|.......|.|..:|.||...|:.:||:.:..|||||.::|
  Rat   120 TLIKLALPHLRKSKGNIINISSLVGAIGQSQALTYVATKGAVTAMTKALALDESRYGVRVNCISP 184

  Fly   186 GVIITEL-QRRGGLDQEAYVKFLEHAKVTHALGRPGEVKEVAAAIAFLASDEASFSTGISLPVDG 249
            |.|.|.| |.......:.....|| ..:...|||.|:..||.||..|||| ||:|.||:.|.:.|
  Rat   185 GNIWTPLWQELAAATSDPRATILE-GTLAQPLGRMGQPAEVGAAAVFLAS-EATFCTGLELFMTG 247

  Fly   250 G 250
            |
  Rat   248 G 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12171NP_649563.1 Rossmann-fold NAD(P)(+)-binding proteins 4..254 CDD:473865 92/261 (35%)
Hsd17b14NP_001178040.1 Rossmann-fold NAD(P)(+)-binding proteins 1..256 CDD:473865 92/261 (35%)

Return to query results.
Submit another query.