DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12171 and hsdl1

DIOPT Version :9

Sequence 1:NP_649563.1 Gene:CG12171 / 40690 FlyBaseID:FBgn0037354 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_001008607.1 Gene:hsdl1 / 494064 ZFINID:ZDB-GENE-041212-31 Length:319 Species:Danio rerio


Alignment Length:218 Identity:58/218 - (26%)
Similarity:103/218 - (47%) Gaps:13/218 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IVTGASSGIGAGTSVLLAKLGGLLTIVGRNLDKLNETAEQIVAAGGAPALQVAADIN-SESDVQG 73
            |:.|||..|....:..||:.|..:.::.::|..:::||..|....|..|:.:.||.| ..|..:.
Zfish    71 IICGASEAIAKAYAEELARHGICVILISKDLSSVSDTARLISNNYGVEAICIEADFNQGPSACKP 135

  Fly    74 IVSATLAKHGRIDVLVNN-AGILELGSIENTSLEQFDRVM----NTNVRSLYQLTHLVTPELI-K 132
            |..|..:|.  |..:||: .|.||   |....||..:.|:    :.|:.:...:|.|..|.:: :
Zfish   136 IKDAISSKD--IGFIVNSFDGTLE---ISQNFLELSESVLWGTIDRNIAATTLVTRLALPAMMER 195

  Fly   133 TKGNIVNVSSVNGIRSFPGVLAYNVSKAAVDQFTRCVALELAPKGVRVNSVNPGVIITELQRRGG 197
            .:|.:||:||.:.....|...|::.|.|.:|.|:|.:..|...:||.|.|:.|..:.:: :..|.
Zfish   196 GRGAVVNISSGHCFHPIPRKAAFSASTAFLDNFSRSLQYEYGDQGVFVQSLLPFRVASQ-RPEGS 259

  Fly   198 LDQEAYVKFLEHAKVTHALGRPG 220
            ....:::........:|||...|
Zfish   260 APPASWLVPSPQVYASHALSTLG 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12171NP_649563.1 fabG 2..251 CDD:235975 58/218 (27%)
NADB_Rossmann 4..254 CDD:304358 58/218 (27%)
hsdl1NP_001008607.1 Required for mitochondria translocation. /evidence=ECO:0000250 2..82 5/10 (50%)
17beta-HSD1_like_SDR_c 67..307 CDD:187614 58/218 (27%)
adh_short 68..248 CDD:278532 52/181 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D913128at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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