DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12171 and hsd17b1

DIOPT Version :10

Sequence 1:NP_649563.1 Gene:CG12171 / 40690 FlyBaseID:FBgn0037354 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_991147.3 Gene:hsd17b1 / 402842 ZFINID:ZDB-GENE-040901-5 Length:293 Species:Danio rerio


Alignment Length:235 Identity:65/235 - (27%)
Similarity:107/235 - (45%) Gaps:39/235 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KDKVIIVTGASSGIGAGTSVLLA-------KLGGLLTIVGRNLDKLNETAEQI--VAAGGAPALQ 60
            :.||:::||.|||||...:|.||       |:...:    |||||.....|.:  :.......||
Zfish     2 EQKVVLITGCSSGIGLSLAVHLASNPAKAYKVYATM----RNLDKKQRLLESVRGLHKDTLDILQ 62

  Fly    61 VAADINSESDVQGIVSATL-AKHGRIDVLVNNAGILELGSIENTSLEQFDRVMNTNVRSLYQLTH 124
            :  |:   :|.|.|:.|.. ...||||:||.|||:..:|.:|..||:....:::.|:....:...
Zfish    63 M--DV---TDQQSILDAQRNVTEGRIDILVCNAGVGLMGPLETHSLDTIRAILDVNLLGTIRTIQ 122

  Fly   125 LVTPELIKTK-GNIVNVSSVNGIRSFPGVLAYNVSKAAVDQFTRCVALELAPKGVRVNSVNPGVI 188
            ...|::.|.: |.|:...|:.|::..|....|..||.|::.....:|:.|....:.::.:..|.:
Zfish   123 TFLPDMKKKRHGRILVTGSMGGLQGLPFNEVYCASKFAIEGACESLAILLQHFNIHISLIECGPV 187

  Fly   189 ITELQRRGGLDQEAYVKFLEHAKVTHALGRPGE-VKEVAA 227
            .|:              ||.:.|.|    .||: |.||.|
Zfish   188 NTD--------------FLMNLKRT----EPGDKVLEVDA 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12171NP_649563.1 Rossmann-fold NAD(P)(+)-binding proteins 4..254 CDD:473865 65/235 (28%)
hsd17b1NP_991147.3 None

Return to query results.
Submit another query.