DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12171 and Rdh1

DIOPT Version :10

Sequence 1:NP_649563.1 Gene:CG12171 / 40690 FlyBaseID:FBgn0037354 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster


Alignment Length:240 Identity:68/240 - (28%)
Similarity:116/240 - (48%) Gaps:20/240 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVIIVTGASSGIGAGTSVLLAKLGGLLTIVGRNLDKLNETAEQIV-AAGGAPALQVAADINSESD 70
            ||.|||||::|||..|::.:|:.||.:.:..|::::..:..:.|: ............|::|...
  Fly    44 KVFIVTGANTGIGKETALEIARRGGTVYLACRDMNRCEKARKDIIKETNNQNIFSRELDLSSLDS 108

  Fly    71 VQGIVSATLAKHGRIDVLVNNAGILELGSIENTSLEQFDRVMNTNVRSLYQLTHL---------- 125
            ::..|.....:..::.||:||||::...  :..:.:.::..:..|....:.||:|          
  Fly   109 IRKFVDGFKKEQPKLHVLINNAGVMRCP--KTLTKDGYELQLGVNHIGHFLLTNLLLDVLKNSAP 171

  Fly   126 ----VTPELIKTKGNIVNVSSVNGIRSFPGVLAYNVSKAAVDQFTRCVALELAPKGVRVNSVNPG 186
                |...|...:|:| ||:.:|..:|:...|||:.||.|...|||.:|..|...||.||:::||
  Fly   172 SRIVVVSSLAHARGSI-NVADLNSEKSYDEGLAYSQSKLANVLFTRELAKRLEGSGVTVNALHPG 235

  Fly   187 VIITELQRRGGLDQEAYVKFLEHAKVTHALGRP--GEVKEVAAAI 229
            |:.|||.|.....|...|||.....:...|..|  |....:.||:
  Fly   236 VVDTELARNWAFFQTNLVKFFLKPMIWPLLKTPKSGAQTSIYAAL 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12171NP_649563.1 Rossmann-fold NAD(P)(+)-binding proteins 4..254 CDD:473865 68/240 (28%)
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 68/240 (28%)

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