DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12171 and Hsdl2

DIOPT Version :10

Sequence 1:NP_649563.1 Gene:CG12171 / 40690 FlyBaseID:FBgn0037354 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_001020868.1 Gene:Hsdl2 / 313200 RGDID:1305387 Length:524 Species:Rattus norvegicus


Alignment Length:206 Identity:59/206 - (28%)
Similarity:94/206 - (45%) Gaps:14/206 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IIVTGASSGIGAGTSVLLAKLGGLLTIVGRN-------LDKLNETAEQIVAAGGAPALQVAADIN 66
            :.:||||.|||...::..||.|..:.|..:.       |..:...||:|.|||| .||....|:.
  Rat    13 VFITGASRGIGKAIALKAAKDGANIVIAAKTTQRHPKLLGTIYTAAEEIEAAGG-KALPCVVDVR 76

  Fly    67 SESDVQGIVSATLAKHGRIDVLVNNAGILELGSIENTSLEQFDRVMNTNVRSLYQLTHLVTPELI 131
            .|..:...|...:.:.|.||:|||||..:.|.:...|..::.|.:|:.|.|..|..:....|.|.
  Rat    77 DEQQINSAVEKAVERFGGIDILVNNASAISLTNTLETPTKRVDLMMSVNTRGTYLTSKACIPFLK 141

  Fly   132 KTK-GNIVNVSSVNGIRS--FPGVLAYNVSKAAVDQFTRCVALELAPKGVRVNSVNPGVII--TE 191
            |:| .:|:|:|....:..  |....||.::|..:......:|.|...: :.||::.|...|  ..
  Rat   142 KSKVAHILNLSPPLNLNPMWFKQHCAYTIAKYGMSMCVLGMAEEFRGE-IAVNALWPRTAIHTAA 205

  Fly   192 LQRRGGLDQEA 202
            :...||...|:
  Rat   206 MDMLGGAGVES 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12171NP_649563.1 Rossmann-fold NAD(P)(+)-binding proteins 4..254 CDD:473865 59/206 (29%)
Hsdl2NP_001020868.1 HSDL2_SDR_c 8..248 CDD:187663 59/206 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 283..410
SCP2 424..517 CDD:460423
Blue background indicates that the domain is not in the aligned region.

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