DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12171 and rdh8a

DIOPT Version :10

Sequence 1:NP_649563.1 Gene:CG12171 / 40690 FlyBaseID:FBgn0037354 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_957001.1 Gene:rdh8a / 280648 ZFINID:ZDB-GENE-021115-3 Length:318 Species:Danio rerio


Alignment Length:230 Identity:73/230 - (31%)
Similarity:121/230 - (52%) Gaps:33/230 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVIIVTGASSGIGAGTSVLLA-----KLGGLLTIVGRNLDKLNETAEQIVAAG---GAPALQVAA 63
            ||:::||.|||||...:||||     :...:.|:  |:|.|.:...|   |||   |.....:..
Zfish     8 KVVLITGCSSGIGLRIAVLLARDEQKRYHVIATM--RDLKKKDRLVE---AAGEVYGQTLTLLPL 67

  Fly    64 DINSESDVQGIVSATLAKHGRIDVLVNNAGILELGSIENTSLEQFDRVMNTNVRSLYQLTHLVTP 128
            ||.|:..|:..|::...:|  ||||:||||:..||.:|:.|:::..||..||.....::...|.|
Zfish    68 DICSDESVRQCVNSVKDRH--IDVLINNAGVGLLGPVESISMDEMKRVFETNFFGTVRMIKEVMP 130

  Fly   129 ELIKTK-GNIVNVSSVNGIRSFPGVL---AYNVSKAAVDQFTRCVALELAPKGVRVNSVNPGVII 189
            ::.|.: |:|:.:|||.|::   ||:   .|..||.|::.|...:|::|....|:::.:.||.:.
Zfish   131 DMKKRQAGHIIIMSSVMGLQ---GVVFNDVYTASKFAIEGFCESMAVQLLKFNVKLSLIEPGPVH 192

  Fly   190 TELQRRGGLDQEAYVKFLEH-AKVTHALGRPGEVK 223
            ||.:          .|.:|. ||:.:....|..|:
Zfish   193 TEFE----------TKMMEEVAKMEYPGADPDTVR 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12171NP_649563.1 Rossmann-fold NAD(P)(+)-binding proteins 4..254 CDD:473865 73/230 (32%)
rdh8aNP_957001.1 type1_17beta-HSD-like_SDR_c 8..265 CDD:187666 73/230 (32%)

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