DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12171 and Hsd17b1

DIOPT Version :10

Sequence 1:NP_649563.1 Gene:CG12171 / 40690 FlyBaseID:FBgn0037354 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_036983.1 Gene:Hsd17b1 / 25322 RGDID:2836 Length:344 Species:Rattus norvegicus


Alignment Length:278 Identity:75/278 - (26%)
Similarity:113/278 - (40%) Gaps:58/278 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VIIVTGASSGIGAGTSVLLA-------KLGGLLTIVGRNLDKLNETAEQIVAAGGAP-ALQVAAD 64
            |:::||.|||||...:|.||       |:...|    |:|.......|...|.|..| :|::.  
  Rat     5 VVLITGCSSGIGLHLAVRLASDRSQSFKVYATL----RDLKSQGPLLEAARAQGCPPGSLEIL-- 63

  Fly    65 INSESDVQGIVSATLAK----HGRIDVLVNNAGILELGSIENTSLEQFDRVMNTNVRSLYQLTHL 125
               |.||:...|...|:    .||:||||.|||....|.:|...|.....|::.||....::...
  Rat    64 ---ELDVRDSESVAAARACVTEGRVDVLVCNAGRGLFGPLEAHELNAVGAVLDVNVLGTIRMLQA 125

  Fly   126 VTPELIKT-KGNIVNVSSVNGIRSFPGVLAYNVSKAAVDQFTRCVALELAPKGVRVNSVNPGVII 189
            ..|::.:. .|.::..:||.|:...|....|..||.|::.....:|:.|...||.|:.:..|.:.
  Rat   126 FLPDMKRRHSGRVLVTASVGGLMGLPFHEVYCASKFALEGLCESLAILLPLFGVHVSLIECGAVH 190

  Fly   190 TELQRR------GGLD-------------QEAYVKFLEHAKVTHALGRPGEVKEVAAAIAFLASD 235
            |....:      |.|:             |..|.:.|..|:      .|.||.|:     ||.:.
  Rat   191 TAFHEKLEGGPGGALERADAQTRHLFAHYQRGYEQALSEAQ------DPEEVTEL-----FLTAM 244

  Fly   236 EAS------FSTGISLPV 247
            .|.      |||...||:
  Rat   245 RAPQPALRYFSTNRFLPL 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12171NP_649563.1 Rossmann-fold NAD(P)(+)-binding proteins 4..254 CDD:473865 75/278 (27%)
Hsd17b1NP_036983.1 Rossmann-fold NAD(P)(+)-binding proteins 4..260 CDD:473865 73/274 (27%)

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