DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12171 and Rdh8

DIOPT Version :10

Sequence 1:NP_649563.1 Gene:CG12171 / 40690 FlyBaseID:FBgn0037354 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_001025461.1 Gene:Rdh8 / 235033 MGIID:2685028 Length:317 Species:Mus musculus


Alignment Length:201 Identity:63/201 - (31%)
Similarity:104/201 - (51%) Gaps:22/201 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KDKVIIVTGASSGIGAGTSVLLA-----KLGGLLTIVGRNLDKLNETAEQIVAAG---GAPALQV 61
            :.:.::::|.|||||...::.||     :...:.|:  |:|.| .|..|  .|||   |.....|
Mouse     4 QQRTVLISGCSSGIGLELALQLAHDPRQRYQVVATM--RDLGK-KEPLE--AAAGEALGKTLSVV 63

  Fly    62 AADINSESDVQGIVSATLAKHGRIDVLVNNAGILELGSIENTSLEQFDRVMNTNVRSLYQLTHLV 126
            ..|:.::..|...:|.  .:.|::||||||||:..:|.:|..||.....|.|||.....:|...|
Mouse    64 QLDVCNDESVTDCLSH--IEGGQVDVLVNNAGVGLVGPLEGLSLATMQSVFNTNFFGAVRLVKAV 126

  Fly   127 TPELIKTK-GNIVNVSSVNGIRSFPGVL---AYNVSKAAVDQFTRCVALELAPKGVRVNSVNPGV 187
            .|.:.:.: |:||.||||.|::   ||:   .|..||.|::.|...:|::|....:.::.|.||.
Mouse   127 LPGMKRRRQGHIVVVSSVMGLQ---GVMFNDVYAASKFALEGFFESLAIQLRQFNIFISMVEPGP 188

  Fly   188 IITELQ 193
            :.|:.:
Mouse   189 VTTDFE 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12171NP_649563.1 Rossmann-fold NAD(P)(+)-binding proteins 4..254 CDD:473865 63/201 (31%)
Rdh8NP_001025461.1 Rossmann-fold NAD(P)(+)-binding proteins 6..263 CDD:473865 63/199 (32%)

Return to query results.
Submit another query.