DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12171 and dhs-18

DIOPT Version :10

Sequence 1:NP_649563.1 Gene:CG12171 / 40690 FlyBaseID:FBgn0037354 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_505812.1 Gene:dhs-18 / 179529 WormBaseID:WBGene00000981 Length:293 Species:Caenorhabditis elegans


Alignment Length:250 Identity:73/250 - (29%)
Similarity:117/250 - (46%) Gaps:29/250 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FKDKVIIVTGASSGIGAGTSVLLAKLGGLLTIVGRNL---DKLNET----AEQIVAAGGAPALQV 61
            |..|.:.:||||.|||...::.|||.|..:.:..:..   .||..|    |.:|..||| .||..
 Worm    11 FAGKTVFITGASRGIGKEIALKLAKDGANIVVAAKTATAHPKLPGTIYTAAAEIEKAGG-HALPC 74

  Fly    62 AADINSESDVQGIVSATLAKHGRIDVLVNNAGILELGSIENTSLEQFDRVMNTNVRSLYQLTHLV 126
            ..|:..|:.|:..|.|.:.|.|.||:|:|||..:.|.:.|:|.::::|.:.:.|.|..|.||...
 Worm    75 VVDVRDEAAVKAAVDAAVKKFGGIDILINNASAISLTNTEDTDMKRYDLMHSINTRGTYLLTKTC 139

  Fly   127 TPELIKTKG-NIVNVSSVNGIRS--FPGVLAYNVSKAAVDQFTRCVA---LELAPKGVRVNSVNP 185
            .|.|.|.|. :::|:|....:.:  |...:.|.::|..:   :.||.   .|..|.|:.||::.|
 Worm   140 LPYLKKGKNPHVLNISPPLDMEAKWFGPHVGYTMAKFGM---SMCVLGHHEEFRPYGIAVNALWP 201

  Fly   186 GVIITELQRRGGLDQEAYVKFLEHAKVTHALGRPGEVKEVAAAIAFLASDEASFS 240
            ...|          ..:.::||.|.. ..|..|...:. ..:|.|.|:.|...|:
 Worm   202 LTAI----------WTSAMEFLSHGG-DSAGNRKASIM-ADSAYAILSKDSKKFT 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12171NP_649563.1 Rossmann-fold NAD(P)(+)-binding proteins 4..254 CDD:473865 73/249 (29%)
dhs-18NP_505812.1 PRK08278 11..279 CDD:181349 73/249 (29%)

Return to query results.
Submit another query.