DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12171 and decr-1.3

DIOPT Version :9

Sequence 1:NP_649563.1 Gene:CG12171 / 40690 FlyBaseID:FBgn0037354 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_495714.1 Gene:decr-1.3 / 174316 WormBaseID:WBGene00011467 Length:309 Species:Caenorhabditis elegans


Alignment Length:262 Identity:81/262 - (30%)
Similarity:125/262 - (47%) Gaps:24/262 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SFKDKVIIVTGASSGIGAGTSVLLAKLGGLLTIVGRNLDKLNETAEQIVAAGGAPALQVAADINS 67
            :.|.||.:|||..:|||...:...|.||..:.|..|.::||.:|||:|:...|........||..
 Worm    22 ALKGKVALVTGGGTGIGKAIATTFAHLGASVAIAARRMEKLEQTAEEIMKTTGGICEPFRMDIKD 86

  Fly    68 ESDVQGIVSAT-------LAKHGRIDVLVNNAGILELGSIENTSLEQFDRVMNTNVRSLYQLTHL 125
                .|:||.|       ..||.  |:|||||....:.:.|..|......:::..::.    |..
 Worm    87 ----PGMVSDTFDKIDKKFGKHP--DILVNNAAGNFIMATERLSPNAHGTIIDIVLKG----TMN 141

  Fly   126 VTPEL------IKTKGNIVNVSSVNGIRSFPGVLAYNVSKAAVDQFTRCVALELAPKGVRVNSVN 184
            ||.||      .||..::.::::.......|.::...||||.|:..|:.:|.|.:..|:|.|:|:
 Worm   142 VTTELGKRCIQSKTGASVTSITAAYARSGAPFIVPSAVSKAGVEIMTKSLATEWSKYGLRFNAVS 206

  Fly   185 PGVIITELQRRGGLDQEAYVKFLEHAKVTHALGRPGEVKEVAAAIAFLASDEASFSTGISLPVDG 249
            ||.|.|: ...|.|.........|..|..:..||.|..:|||..:||::||..||..|:.:.:||
 Worm   207 PGPIPTK-GAWGRLFSGEMGDVAEKMKELNPEGRSGTPEEVANLVAFISSDHMSFMNGVIIDLDG 270

  Fly   250 GR 251
            |:
 Worm   271 GQ 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12171NP_649563.1 fabG 2..251 CDD:235975 80/260 (31%)
NADB_Rossmann 4..254 CDD:304358 81/261 (31%)
decr-1.3NP_495714.1 TER_DECR_SDR_a 23..274 CDD:187627 81/261 (31%)
PRK07677 25..272 CDD:181077 79/257 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0725
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.