DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12171 and hsdl1

DIOPT Version :9

Sequence 1:NP_649563.1 Gene:CG12171 / 40690 FlyBaseID:FBgn0037354 Length:257 Species:Drosophila melanogaster
Sequence 2:XP_002937365.1 Gene:hsdl1 / 100489686 XenbaseID:XB-GENE-989915 Length:322 Species:Xenopus tropicalis


Alignment Length:190 Identity:54/190 - (28%)
Similarity:91/190 - (47%) Gaps:14/190 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IVTGASSGIGAGTSVLLAKLGGLLTIVGRNLDKLNETAEQIVAAGGAPALQVAADINSESDVQGI 74
            :||||:|||....:..||:.|..:.:|..|.:||.:.::.|.|..|.....:..|.....:....
 Frog    71 VVTGATSGIAQAYAEELARCGMNVVLVDNNREKLQKMSDSITATHGVNTSFIEVDFCKGHEAYRP 135

  Fly    75 VSATLAKHGRIDVLVNNAG-ILEL-GSIENTSLEQFDRVMNTNVRSLYQLTHLVTPELI-KTKGN 136
            :...| :|..:.:|||..| .||. .|:.....||..::::.:|.:...:..:|.|.:. :.:|.
 Frog   136 IKDAL-RHVEVGILVNCVGNFLEYPQSVIECPEEQLWKIIHVSVSAATIMAKIVVPGMAQRRRGA 199

  Fly   137 IVNVSSVNGIRS-----FPGVLAYNVSKAAVDQFTRCVALELAPKGVRVNSVNPGVIITE 191
            |||||    .||     || :..|...:..:|.||:.:..||:.||:.|.|:.|..:..|
 Frog   200 IVNVS----FRSCCKPNFP-MTMYTPCQLYMDGFTKELQSELSSKGIFVQSLTPLCVAKE 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12171NP_649563.1 fabG 2..251 CDD:235975 54/190 (28%)
NADB_Rossmann 4..254 CDD:304358 54/190 (28%)
hsdl1XP_002937365.1 17beta-HSD1_like_SDR_c 67..309 CDD:187614 54/190 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D913128at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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