DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL13A and RPL16A

DIOPT Version :9

Sequence 1:NP_649560.1 Gene:RpL13A / 40687 FlyBaseID:FBgn0037351 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_012133.1 Gene:RPL16A / 854673 SGDID:S000001395 Length:199 Species:Saccharomyces cerevisiae


Alignment Length:196 Identity:113/196 - (57%)
Similarity:141/196 - (71%) Gaps:4/196 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRCNVNPARGPF 73
            |||||:|||:|||||||||.||.|.|:.|||.||||:||.|:|||:|:..:|||....|..||||
Yeast     7 VVIDGKGHLVGRLASVVAKQLLNGQKIVVVRAEELNISGEFFRNKLKYHDFLRKATAFNKTRGPF 71

  Fly    74 HFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVVPIAMRVLTLRSDRKYC 138
            ||||||||||||:|||:.|||.||:|||.||:||:|||.||||::|||||.|:|||.|:..|||.
Yeast    72 HFRAPSRIFYKALRGMVSHKTARGKAALERLKVFEGIPPPYDKKKRVVVPQALRVLRLKPGRKYT 136

  Fly   139 QVGRLSHEVGWHYQDVIKSLERKRKAKLRVTLKHNRELKKLTVKARENIAKAAE-PFNKIIKSYG 202
            .:|:||..|||.|:||:..||.|||..   :.::..:.:..|.|.....|.||| ...|.:.:.|
Yeast   137 TLGKLSTSVGWKYEDVVAKLEAKRKVS---SAEYYAKKRAFTKKVASANATAAESDVAKQLAALG 198

  Fly   203 Y 203
            |
Yeast   199 Y 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL13ANP_649560.1 Ribosomal_L13 6..203 CDD:412316 111/194 (57%)
RPL16ANP_012133.1 PTZ00068 6..199 CDD:240253 111/194 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342003
Domainoid 1 1.000 160 1.000 Domainoid score I859
eggNOG 1 0.900 - - E1_COG0102
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 218 1.000 Inparanoid score I779
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53755
OrthoFinder 1 1.000 - - FOG0001720
OrthoInspector 1 1.000 - - otm46602
orthoMCL 1 0.900 - - OOG6_100793
Panther 1 1.100 - - LDO PTHR11545
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1111
SonicParanoid 1 1.000 - - X1276
TreeFam 1 0.960 - -
1413.790

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