DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL13A and MRPL13

DIOPT Version :9

Sequence 1:NP_649560.1 Gene:RpL13A / 40687 FlyBaseID:FBgn0037351 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_054797.2 Gene:MRPL13 / 28998 HGNCID:14278 Length:178 Species:Homo sapiens


Alignment Length:146 Identity:36/146 - (24%)
Similarity:59/146 - (40%) Gaps:21/146 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VIDGRGHLLGRLASVVAKYLLQ-------------GGKVAVVRCEELNLSGHFYRNKI--KFLAY 59
            ::||:....|:||: :|...||             |..|.::....:..||:.:..|:  ....|
Human    20 LLDGKMQPPGKLAA-MASIRLQGLHKPVYHALSDCGDHVVIMNTRHIAFSGNKWEQKVYSSHTGY 83

  Fly    60 LRKRCNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVVPI 124
            ......|..|:  .|.|.|..|...|:.||:|....| :..:.||.:|.....|.|..:.:|..:
Human    84 PGGFRQVTAAQ--LHLRDPVAIVKLAIYGMLPKNLHR-RTMMERLHLFPDEYIPEDILKNLVEEL 145

  Fly   125 AM-RVLTLRSDRKYCQ 139
            .. |.:..|.| :|.|
Human   146 PQPRKIPKRLD-EYTQ 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL13ANP_649560.1 Ribosomal_L13 6..203 CDD:412316 36/146 (25%)
MRPL13NP_054797.2 Ribosomal_L13 16..134 CDD:395454 28/117 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0102
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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